RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 ZNF208O43345 1280 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 NDUFB8O95169 186 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 CD3DP04234 171 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 MAOAP21397 527 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 PRPS1P60891 318 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 FAM53BQ14153 422 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 TMEM56Q96MV1 263 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 OR2S2Q9NQN1 319 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 OR52A1Q9UKL2 312 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 TMEM56-RWDD3S4R434 201 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 USP34Q70CQ2 3546 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 RAMP1O60894 148 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 LRP3O75074 770 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 HPRT1P00492 218 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 CD34P28906 385 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 POLR2HP52434 150 aaKnown RBP13.75□□□□□ -0.21
FXN-201ENST00000377270 ZNF595Q8IYB9 648 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 OR4K17Q8NGC6 315 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 OR1J2Q8NGS2 313 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 CMBLQ96DG6 245 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 MMABQ96EY8 250 aaPredicted RBP13.75□□□□□ -0.21
FXN-201ENST00000377270 SLC35E1Q96K37 410 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 F6UZH7 168 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 IFNA21P01568 189 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 FGF5P12034 268 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 UBE2G2P60604 165 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.75□□□□□ -0.21
FXN-201ENST00000377270 OR8S1Q8NH09 359 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 OR14L1PQ8NHC6 308 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 WWTR1Q9GZV5 400 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 Q9N2J8 555 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 PLSCR4Q9NRQ2 329 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 AURKAIP1Q9NWT8 199 aaPredicted RBP13.75□□□□□ -0.21
FXN-201ENST00000377270 LRIT1Q9P2V4 623 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 PPIAL4AQ9Y536 164 aa13.75□□□□□ -0.21
FXN-201ENST00000377270 A8MVM7 634 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 OR2T7P0C7T2 308 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 PSMB10P40306 273 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 LTBQ06643 244 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 STEAP1BQ6NZ63 245 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 DPY19L2P2Q6ZN68 376 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 SLC35D2Q76EJ3 337 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 C1orf87Q8N0U7 546 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 TSTD1Q8NFU3 115 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 OR2T27Q8NH04 317 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 LMX1AQ8TE12 382 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 TBL1XR1Q9BZK7 514 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 CLDN16Q9Y5I7 305 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 LOC102724200A0A096LPH7 203 aaPredicted RBP13.74□□□□□ -0.21
FXN-201ENST00000377270 ZNF320A2RRD8 509 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 ANKUB1A6NFN9 424 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 GUCA2AQ02747 115 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 ZNF141Q15928 474 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 AADACL3Q5VUY0 350 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 YOD1Q5VVQ6 348 aaPredicted RBP13.74□□□□□ -0.21
FXN-201ENST00000377270 SYT13Q7L8C5 426 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 ZNF550Q7Z398 422 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 GBGT1Q8N5D6 347 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 OR4C5Q8NGB2 326 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 OR4C3Q8NH37 302 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 DVL3Q92997 716 aaPredicted RBP13.74□□□□□ -0.21
FXN-201ENST00000377270 TSLPQ969D9 159 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 NUDT16L1Q9BRJ7 211 aaKnown RBP13.74□□□□□ -0.21
FXN-201ENST00000377270 ZNF281Q9Y2X9 895 aa13.74□□□□□ -0.21
FXN-201ENST00000377270 MEIS3P1A6NDR6 274 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 SLC25A17O43808 307 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 PRKNO60260 465 aaPredicted RBP13.73□□□□□ -0.21
FXN-201ENST00000377270 CT45A8P0DMV1 189 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 CT45A9P0DMV2 189 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 SLC6A6P31641 620 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 FHL1Q13642 323 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 ELOCQ15369 112 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 OCIAD2Q56VL3 154 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 CT45A2Q5DJT8 189 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 LDLRAD2Q5SZI1 272 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 ZNF585AQ6P3V2 769 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 STAC2Q6ZMT1 411 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 Q6ZRG5 221 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 MYPOPQ86VE0 399 aaPredicted RBP13.73□□□□□ -0.21
FXN-201ENST00000377270 CATSPERDQ86XM0 798 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 MRPL41Q8IXM3 137 aaKnown RBP13.73□□□□□ -0.21
FXN-201ENST00000377270 C16orf52Q8NHV5 167 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 CASTOR1Q8WTX7 329 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 ZMYND19Q96E35 227 aaPredicted RBP13.73□□□□□ -0.21
FXN-201ENST00000377270 EIF5A2Q9GZV4 153 aaKnown RBP13.73□□□□□ -0.21
FXN-201ENST00000377270 NELFAQ9H3P2 528 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 SOHLH2Q9NX45 425 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 NOP16Q9Y3C1 178 aaKnown RBP13.73□□□□□ -0.21
FXN-201ENST00000377270 IGHV1OR15-9A0A0B4J2B8 117 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 SCGB1D1O95968 90 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 ZNF41P51814 821 aaPredicted RBP13.73□□□□□ -0.21
FXN-201ENST00000377270 IGLV3-21P80748 117 aaPredicted RBP13.73□□□□□ -0.21
FXN-201ENST00000377270 DHRS2Q13268 280 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 LINC01551Q86U37 167 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 PLPP5Q8NEB5 264 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 OR52E2Q8NGJ4 325 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 DCUN1D4Q92564 292 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 SMIM12Q96EX1 92 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 SLC25A21Q9BQT8 299 aaPredicted RBP13.73□□□□□ -0.21
FXN-201ENST00000377270 KCNJ16Q9NPI9 418 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms