RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 DMWDQ09019 674 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 CLPPQ16740 277 aaPredicted RBP12.11□□□□□ -0.47
C9orf47-203ENST00000375851 LRRTM1Q86UE6 522 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 CDC20BQ86Y33 519 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 GPR87Q9BY21 358 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 ZNF629Q9UEG4 869 aaPredicted RBP12.11□□□□□ -0.47
C9orf47-203ENST00000375851 OR4C45A6NMZ5 311 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 CA6P23280 308 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 THBS3P49746 956 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 PRSS12P56730 875 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 SP6Q3SY56 376 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 Q6ZRG5 221 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 C6orf201Q7Z4U5 140 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 OR10P1Q8NGE3 313 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 OR8U1Q8NH10 309 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 UBALD1Q8TB05 177 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 GALMQ96C23 342 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 ZNF501Q96CX3 271 aaPredicted RBP12.11□□□□□ -0.47
C9orf47-203ENST00000375851 LIN37Q96GY3 246 aaPredicted RBP12.11□□□□□ -0.47
C9orf47-203ENST00000375851 AK3Q9UIJ7 227 aa12.11□□□□□ -0.47
C9orf47-203ENST00000375851 TDRD6O60522 2096 aaKnown RBP12.1□□□□□ -0.47
C9orf47-203ENST00000375851 OR3A4PP47883 348 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 DHODHQ02127 395 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 ST3GAL2Q16842 350 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.1□□□□□ -0.47
C9orf47-203ENST00000375851 CXorf67Q86X51 503 aaPredicted RBP12.1□□□□□ -0.47
C9orf47-203ENST00000375851 ASB13Q8WXK3 278 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 MARVELD1Q9BSK0 173 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 FAAP24Q9BTP7 215 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 ADAT1Q9BUB4 502 aaKnown RBP12.1□□□□□ -0.47
C9orf47-203ENST00000375851 SLC25A32Q9H2D1 315 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 GCM2O75603 506 aaPredicted RBP12.1□□□□□ -0.47
C9orf47-203ENST00000375851 IGKV1D-16P01601 117 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 IAPPP10997 89 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 CCL2P13500 99 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 ADIRFQ15847 76 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 ALKBH6Q3KRA9 238 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 ZFP82Q8N141 532 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 ZDHHC22Q8N966 263 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 OR10X1Q8NGY0 326 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 GPR31O00270 319 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 CT45A6P0DMU7 189 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 CT45A5P0DMU8 189 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 CT45A7P0DMV0 189 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 PRDX4Q13162 271 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 CT45A1Q5HYN5 189 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 FAM74A1Q5RGS3 127 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 COL13A1Q5TAT6 717 aaPredicted RBP12.1□□□□□ -0.47
C9orf47-203ENST00000375851 THNSL2Q86YJ6 484 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 OR8B12Q8NGG6 310 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 CT45A3Q8NHU0 189 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 ZNF721Q8TF20 911 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 SMCO4Q9NRQ5 59 aa12.1□□□□□ -0.47
C9orf47-203ENST00000375851 COLQQ9Y215 455 aaPredicted RBP12.1□□□□□ -0.47
C9orf47-203ENST00000375851 RIF1Q5UIP0 2472 aaKnown RBP12.1□□□□□ -0.47
C9orf47-203ENST00000375851 SPRY3O43610 288 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 HLA-DOBP13765 273 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 ACKR3P25106 362 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 S100A7P31151 101 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 TAGLN2P37802 199 aaKnown RBP12.09□□□□□ -0.47
C9orf47-203ENST00000375851 LCN15Q6UWW0 184 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 ST8SIA2Q92186 375 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 F6UZH7 168 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 LYZL6O75951 148 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 FPR2P25090 351 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 SUB1P53999 127 aaKnown RBP eCLIP12.09□□□□□ -0.47
C9orf47-203ENST00000375851 LSM6P62312 80 aaKnown RBP12.09□□□□□ -0.47
C9orf47-203ENST00000375851 DHRS2Q13268 280 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 Q8IYB0 196 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 PPP1R14DQ9NXH3 145 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 KPTNQ9Y664 436 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 ZNF318Q5VUA4 2279 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 MDFIC2A0A1B0GVS7 189 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 ICMTO60725 284 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 BGLAPP02818 100 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 GABRA4P48169 554 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 PRSS53Q2L4Q9 553 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 OR2Z1Q8NG97 314 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 SAMD10Q9BYL1 202 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 ABCD4O14678 606 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 PMS2CLQ68D20 193 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 OR10AC1Q8NH08 325 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 AP1S3Q96PC3 154 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 C20orf24Q9BUV8 137 aa12.09□□□□□ -0.47
C9orf47-203ENST00000375851 SF3B5Q9BWJ5 86 aaKnown RBP12.09□□□□□ -0.47
C9orf47-203ENST00000375851 H3BP45 60 aa12.08□□□□□ -0.47
C9orf47-203ENST00000375851 SELENOPP49908 381 aa12.08□□□□□ -0.47
C9orf47-203ENST00000375851 ZNF83P51522 516 aa12.08□□□□□ -0.47
C9orf47-203ENST00000375851 SLC38A6Q8IZM9 456 aa12.08□□□□□ -0.47
C9orf47-203ENST00000375851 FAM58AQ8N1B3 248 aa12.08□□□□□ -0.47
C9orf47-203ENST00000375851 MUC20Q8N307 709 aaPredicted RBP12.08□□□□□ -0.47
C9orf47-203ENST00000375851 PRSS27Q9BQR3 290 aa12.08□□□□□ -0.47
C9orf47-203ENST00000375851 RFPL4AA6NLU0 287 aa12.08□□□□□ -0.48
C9orf47-203ENST00000375851 RFPL4AL1F8VTS6 287 aa12.08□□□□□ -0.48
C9orf47-203ENST00000375851 PTP4A3O75365 173 aa12.08□□□□□ -0.48
C9orf47-203ENST00000375851 BMP5P22003 454 aa12.08□□□□□ -0.48
C9orf47-203ENST00000375851 FBXO17Q96EF6 278 aa12.08□□□□□ -0.48
C9orf47-203ENST00000375851 WDR54Q9H977 334 aa12.08□□□□□ -0.48
C9orf47-203ENST00000375851 LAMP3Q9UQV4 416 aa12.08□□□□□ -0.48
C9orf47-203ENST00000375851 STRAPQ9Y3F4 350 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms