RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TAAR5O14804 337 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 DHHO43323 396 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 NDUFA2O43678 99 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 EIF1BO60739 113 aaKnown RBP12.74□□□□□ -0.37
MSH5-201ENST00000375703 CELA2AP08217 269 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 PTGER4P35408 488 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 PPA1Q15181 289 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 RPL7L1Q6DKI1 246 aaKnown RBP12.74□□□□□ -0.37
MSH5-201ENST00000375703 ZNF799Q96GE5 643 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 UCN2Q96RP3 112 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 TAF9BQ9HBM6 251 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 OCIAD1Q9NX40 245 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 PCDHGA1Q9Y5H4 931 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 ASCC3Q8N3C0 2202 aaKnown RBP12.74□□□□□ -0.37
MSH5-201ENST00000375703 MED12Q93074 2177 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 PMS2P1A4D2B8 440 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 DHRS7CA6NNS2 312 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 CA11O75493 328 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 SNAPINO95295 136 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 F12P00748 615 aaPredicted RBP12.73□□□□□ -0.37
MSH5-201ENST00000375703 TMEM225BP0DP42 221 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 HIST1H3AP68431 136 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 RBM39Q14498 530 aaKnown RBP12.73□□□□□ -0.37
MSH5-201ENST00000375703 IAH1Q2TAA2 248 aaPredicted RBP12.73□□□□□ -0.37
MSH5-201ENST00000375703 HIST2H3PS2Q5TEC6 136 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 RAET1LQ5VY80 246 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 EIF5AL1Q6IS14 154 aaKnown RBP12.73□□□□□ -0.37
MSH5-201ENST00000375703 HIST2H3AQ71DI3 136 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 SULF2Q8IWU5 870 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 SHDQ96IW2 340 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 NAA11Q9BSU3 229 aaPredicted RBP12.73□□□□□ -0.37
MSH5-201ENST00000375703 SEC11CQ9BY50 192 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 SAV1Q9H4B6 383 aaPredicted RBP12.73□□□□□ -0.37
MSH5-201ENST00000375703 PRELID3BQ9Y3B1 194 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 LRP3O75074 770 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 VAMP5O95183 116 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 APOC1P02654 83 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 HKR1P10072 659 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 ECI1P42126 302 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 PCOLCEQ15113 449 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 CBLN2Q8IUK8 224 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 SPTSSAQ969W0 71 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 C10orf35Q96D05 121 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 SMIM8Q96KF7 97 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 JSRP1Q96MG2 331 aaPredicted RBP12.73□□□□□ -0.37
MSH5-201ENST00000375703 CNTNAP3Q9BZ76 1288 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 RHOFQ9HBH0 211 aa12.73□□□□□ -0.37
MSH5-201ENST00000375703 LY6G6EA0A0G2JKS1 128 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 CD63P08962 238 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 PVALBP20472 110 aaPredicted RBP12.72□□□□□ -0.37
MSH5-201ENST00000375703 EPHA8P29322 1005 aaPredicted RBP12.72□□□□□ -0.37
MSH5-201ENST00000375703 OTX1P32242 354 aaPredicted RBP12.72□□□□□ -0.37
MSH5-201ENST00000375703 ZNF133P52736 654 aaPredicted RBP12.72□□□□□ -0.37
MSH5-201ENST00000375703 MTCP1P56278 107 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 DHRS7BQ6IAN0 325 aaPredicted RBP12.72□□□□□ -0.37
MSH5-201ENST00000375703 OPN5Q6U736 354 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 Q6ZSR3 168 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 FOXL2NBQ6ZUU3 175 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 TDHQ8IZJ6 230 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 OR9K2Q8NGE7 335 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 SGK3Q96BR1 496 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 HDHD3Q9BSH5 251 aaPredicted RBP12.72□□□□□ -0.37
MSH5-201ENST00000375703 UBE2ZQ9H832 354 aaPredicted RBP12.72□□□□□ -0.37
MSH5-201ENST00000375703 GPR173Q9NS66 373 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 MLXQ9UH92 298 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 FAM96BQ9Y3D0 163 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 U3KQA8 63 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 ZNF708P17019 499 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 ZNF84P51523 738 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 CHAF1BQ13112 559 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 RPUSD3Q6P087 351 aaKnown RBP12.72□□□□□ -0.37
MSH5-201ENST00000375703 TMEM123Q8N131 208 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 FBXO17Q96EF6 278 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 ULBP2Q9BZM5 246 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 ATPIF1Q9UII2 106 aa12.72□□□□□ -0.37
MSH5-201ENST00000375703 G3V3Y1 287 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 RRP8O43159 456 aaKnown RBP12.71□□□□□ -0.37
MSH5-201ENST00000375703 GDF9O60383 454 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 ZIC3O60481 467 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 CCL3P10147 92 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 RPL12P30050 165 aaKnown RBP12.71□□□□□ -0.37
MSH5-201ENST00000375703 CXCL12P48061 93 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 CAV2P51636 162 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 DSCR4P56555 118 aaPredicted RBP12.71□□□□□ -0.37
MSH5-201ENST00000375703 SNAI3Q3KNW1 292 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 OR2A2Q6IF42 318 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 CCDC54Q8NEL0 328 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 FNDC9Q8TBE3 224 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 ZNF775Q96BV0 537 aaPredicted RBP12.71□□□□□ -0.37
MSH5-201ENST00000375703 Q96M66 194 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 FAAP24Q9BTP7 215 aa12.71□□□□□ -0.37
MSH5-201ENST00000375703 MED6O75586 246 aa12.71□□□□□ -0.38
MSH5-201ENST00000375703 IFNA21P01568 189 aa12.71□□□□□ -0.38
MSH5-201ENST00000375703 CTSDP07339 412 aaPredicted RBP12.71□□□□□ -0.38
MSH5-201ENST00000375703 RCC1P18754 421 aaPredicted RBP12.71□□□□□ -0.38
MSH5-201ENST00000375703 NME2P22392 152 aa12.71□□□□□ -0.38
MSH5-201ENST00000375703 NPBWR1P48145 328 aa12.71□□□□□ -0.38
MSH5-201ENST00000375703 SPEM2Q0P670 501 aa12.71□□□□□ -0.38
MSH5-201ENST00000375703 SMCO1Q147U7 214 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms