RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 RSRP1Q9BUV0 290 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 VN1R1Q9GZP7 353 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 PNRC2Q9NPJ4 139 aaKnown RBP18.57■□□□□ 0.56
UPF3A-202ENST00000375299 SHISA7A6NL88 538 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 SHISA8B8ZZ34 492 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 UMAD1C9J7I0 102 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 PGA4P0DJD7 388 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 PGA3P0DJD8 388 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 EIF2S3P41091 472 aaKnown RBP18.56■□□□□ 0.56
UPF3A-202ENST00000375299 ALDH3B1P43353 468 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 CAMLGP49069 296 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 SULT1A1P50225 295 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 SUMO3P55854 103 aaPredicted RBP18.56■□□□□ 0.56
UPF3A-202ENST00000375299 FBXW4P57775 412 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 MFAP5Q13361 173 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 RHEBQ15382 184 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 DMRTC1Q5HYR2 192 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 CRIP3Q6Q6R5 217 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 LANCL3Q6ZV70 420 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 UEVLDQ8IX04 471 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 FAM24BQ8N5W8 94 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 ZNF283Q8N7M2 679 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 SLC25A43Q8WUT9 341 aaPredicted RBP18.56■□□□□ 0.56
UPF3A-202ENST00000375299 BSCL2Q96G97 398 aaPredicted RBP18.56■□□□□ 0.56
UPF3A-202ENST00000375299 PPP4R1LQ9P1A2 415 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 SEC16AO15027 2179 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 E5RGE8 158 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 AP4M1O00189 453 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 RER1O15258 196 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 RRP8O43159 456 aaKnown RBP18.56■□□□□ 0.56
UPF3A-202ENST00000375299 IGHG1P01857 330 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 SERPINA2P20848 420 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 EIF3IQ13347 325 aaKnown RBP18.56■□□□□ 0.56
UPF3A-202ENST00000375299 ARL6IP1Q15041 203 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 CLEC9AQ6UXN8 241 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 GINS3Q9BRX5 216 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 TM2D1Q9BX74 207 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 LMAN1LQ9HAT1 526 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 NSG2Q9Y328 171 aa18.56■□□□□ 0.56
UPF3A-202ENST00000375299 BORCS7-ASMTA0A0B4J1R7 106 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 A0A1W2PPC4 97 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 CA11O75493 328 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 IGHV2-70P01814 119 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 FOSL2P15408 326 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 RNF4P78317 190 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 ADAM5Q6NVV9 412 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 OR1J1Q8NGS3 322 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 C19orf12Q9NSK7 152 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 STMND1H3BQB6 276 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 MASP2O00187 686 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 SUCLG1P53597 346 aaKnown RBP18.55■□□□□ 0.56
UPF3A-202ENST00000375299 PPA1Q15181 289 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 RTL6Q6ICC9 239 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 RPUSD3Q6P087 351 aaKnown RBP18.55■□□□□ 0.56
UPF3A-202ENST00000375299 SLC25A47Q6Q0C1 308 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 Q6ZS52 159 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.55■□□□□ 0.56
UPF3A-202ENST00000375299 LMX1AQ8TE12 382 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 NPRL2Q8WTW4 380 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 ZDHHC12Q96GR4 267 aa18.55■□□□□ 0.56
UPF3A-202ENST00000375299 DHRS7CA6NNS2 312 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 RHPN2P1A8MT19 583 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 ARG1P05089 322 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 P2RY1P47900 373 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 OR1L3Q8NH93 324 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 EDARADDQ8WWZ3 215 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 WFDC1Q9HC57 220 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 MCTS1Q9ULC4 181 aaKnown RBP18.54■□□□□ 0.56
UPF3A-202ENST00000375299 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.54■□□□□ 0.56
UPF3A-202ENST00000375299 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.54■□□□□ 0.56
UPF3A-202ENST00000375299 A0A1W2PPE2 198 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 MBPP02686 304 aaPredicted RBP18.54■□□□□ 0.56
UPF3A-202ENST00000375299 LTBRP36941 435 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 OR2B8PP59922 312 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 SLC35A1P78382 337 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 MYBPHQ13203 477 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 ACER2Q5QJU3 275 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 LIN37Q96GY3 246 aaPredicted RBP18.54■□□□□ 0.56
UPF3A-202ENST00000375299 PADI1Q9ULC6 663 aa18.54■□□□□ 0.56
UPF3A-202ENST00000375299 EFNA2O43921 213 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 GPR137BO60478 399 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 FHITP49789 147 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 C1orf189Q5VU69 101 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 CARD17Q5XLA6 110 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 PPP1R3BQ86XI6 285 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 GNRHR2Q96P88 292 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 DECR2Q9NUI1 292 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 STRAPQ9Y3F4 350 aaKnown RBP18.53■□□□□ 0.56
UPF3A-202ENST00000375299 E9PLN8 166 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 LMO1P25800 156 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 RAB1AP62820 205 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 GRB2P62993 217 aaKnown RBP18.53■□□□□ 0.56
UPF3A-202ENST00000375299 ZNF239Q16600 458 aaKnown RBP18.53■□□□□ 0.56
UPF3A-202ENST00000375299 TMEM156Q8N614 296 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 SLC35B3Q9H1N7 401 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 TMPRSS5Q9H3S3 457 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 KCNJ16Q9NPI9 418 aa18.53■□□□□ 0.56
UPF3A-202ENST00000375299 IGHV3-20A0A0C4DH32 117 aa18.52■□□□□ 0.56
UPF3A-202ENST00000375299 RAB5CP51148 216 aa18.52■□□□□ 0.56
UPF3A-202ENST00000375299 RAB30Q15771 203 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms