RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 TAAR3PQ9P1P4 343 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 OR1A1Q9P1Q5 309 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 KPTNQ9Y664 436 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 SPTY2D1-AS1A0A0U1RR47 76 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 ETV6P41212 452 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 WDR88Q6ZMY6 472 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 ZNF764Q96H86 408 aaPredicted RBP13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 A0A1W2PRX2 142 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 CD3EP07766 207 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 FGF8P55075 233 aaPredicted RBP13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 Q6ZNB5 142 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 RPEQ96AT9 228 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 BTF3L4Q96K17 158 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 CABLES2Q9BTV7 478 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 PCOLCE2Q9UKZ9 415 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 DUS4LO95620 317 aaKnown RBP13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 GIPP09681 153 aaPredicted RBP13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 LINC00303Q3SY05 128 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 C6orf201Q7Z4U5 140 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 GPX8Q8TED1 209 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 ARHGAP5-AS1Q96IT6 56 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 POM121L2Q96KW2 1035 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 JTBO76095 146 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 NCR3LG1Q68D85 454 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 COMMD1Q8N668 190 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 ZNF629Q9UEG4 869 aaPredicted RBP13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 PF4V1P10720 104 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 COL9A1P20849 921 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 MICBQ29980 383 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 LRP11Q86VZ4 500 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 MRGPRDQ8TDS7 321 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 PERPQ96FX8 193 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 ASIC5Q9NY37 505 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 LAMP3Q9UQV4 416 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 E5RGE8 158 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 ADAM20O43506 726 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 IGLV3-27P01718 113 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 NSG2Q9Y328 171 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 SCGB1C2P0DMR2 95 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 GAR1Q9NY12 217 aaKnown RBP13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 ERRFI1Q9UJM3 462 aaPredicted RBP13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 FOXL2P58012 376 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 ZNF683Q8IZ20 524 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 PELI1Q96FA3 418 aa13.16□□□□□ -0.3
NOTCH4-201ENST00000375023 TOPAZ1Q8N9V7 1692 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 ADAM10O14672 748 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 HPP00738 406 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 TUSC1Q2TAM9 212 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 GABARAPL3Q9BY60 117 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 TRAV17A0A0B4J275 112 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 F2RL2O00254 374 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 SLC25A5P05141 298 aaKnown RBP13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 AMTP48728 403 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 MRPL58Q14197 206 aaKnown RBP13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 FFAR4Q5NUL3 377 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 ZNF793Q6ZN11 406 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 LYG2Q86SG7 212 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 LINC01465Q8N7H1 131 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 GATCO43716 136 aaKnown RBP13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 NGFP01138 241 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 NQO2P16083 231 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 ORM2P19652 201 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 COX5AP20674 150 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 DDOSTP39656 456 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 FUT6P51993 359 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 IP6K3Q96PC2 410 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 NRXN3Q9Y4C0 1643 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 LOC102724200A0A096LPH7 203 aaPredicted RBP13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 LRRC3CA6NJW4 275 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 LMO7DNF2Z398 122 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 BMPR1BO00238 502 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 CTSVO60911 334 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 RNASEKQ6P5S7 137 aaKnown RBP13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 ZDHHC11Q9H8X9 412 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 SUMO1P63165 101 aaKnown RBP13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 VAMP3Q15836 100 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 ANKRD37Q7Z713 158 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 ZG16BQ96DA0 208 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 PRDM14Q9GZV8 571 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 IL21Q9HBE4 155 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 KIF13AQ9H1H9 1805 aa13.15□□□□□ -0.3
NOTCH4-201ENST00000375023 TCTAP57738 103 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 FAM3AP98173 230 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 LHX8Q68G74 356 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 C2orf50Q96LR7 162 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 VPS25Q9BRG1 176 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 TNFSF14O43557 240 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 C19orf57Q0VDD7 668 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 M1APQ8TC57 530 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 OR2D2Q9H210 308 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 PIGMQ9H3S5 423 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 COA4Q9NYJ1 87 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 TOGARAM1Q9Y4F4 1720 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 IGHV3-21A0A0B4J1V1 117 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 FKBP2P26885 142 aaKnown RBP13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 RAE1P78406 368 aaKnown RBP13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 ZNF574Q6ZN55 896 aaPredicted RBP13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 OR10D3Q8NH80 312 aa13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 MRPS18BQ9Y676 258 aaKnown RBP13.14□□□□□ -0.31
NOTCH4-201ENST00000375023 TMEM272A0A1B0GTI8 110 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms