RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 OR2A1Q8NGT9 310 aa5.94□□□□□ -1.46
CHD6-203ENST00000373233 MDH2P40926 338 aaKnown RBP5.94□□□□□ -1.46
CHD6-203ENST00000373233 ECH1Q13011 328 aa5.94□□□□□ -1.46
CHD6-203ENST00000373233 CFAP161Q6P656 301 aa5.94□□□□□ -1.46
CHD6-203ENST00000373233 NUBPLQ8TB37 319 aa5.94□□□□□ -1.46
CHD6-203ENST00000373233 COX14Q96I36 57 aa5.94□□□□□ -1.46
CHD6-203ENST00000373233 MAP1LC3B2A6NCE7 125 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 SNCGO76070 127 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 HRH1P35367 487 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 NIPSNAP1Q9BPW8 284 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 NDUFAF3Q9BU61 184 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 ACTR3CQ9C0K3 210 aaPredicted RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 MAP1LC3BQ9GZQ8 125 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 KCNK7Q9Y2U2 307 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 BLACEA4D250 179 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 PNMTP11086 282 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 TBPP20226 339 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 PTGER1P34995 402 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 DUSP3P51452 185 aaPredicted RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 MESP2Q0VG99 397 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 PNRC1Q12796 327 aaPredicted RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 SLC36A2Q495M3 483 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 LDLRAD2Q5SZI1 272 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 FAM71E1Q6IPT2 247 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 OR13G1Q8NGZ3 307 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 MIXL1Q9H2W2 232 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 J3KTA2 159 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 GPANK1O95872 356 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 HBQ1P09105 142 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 CXCL3P19876 107 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 ERVFC1-1P60608 527 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 ZNF345Q14585 488 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 Q6ZS52 159 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 MMP21Q8N119 569 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 OR1P1Q8NH06 330 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 SLC35E1Q96K37 410 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 KLRF1Q9NZS2 232 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 SLC35A3Q9Y2D2 325 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 AMDHD2Q9Y303 409 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 TMEM265A0A087WTH1 108 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 CD3DP04234 171 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 SDHBP21912 280 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 SELENOHQ8IZQ5 122 aaKnown RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 NKAIN3Q8N8D7 197 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 OR10AD1Q8NGE0 317 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 TM4SF18Q96CE8 201 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 ZC3HAV1LQ96H79 300 aaKnown RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 C2orf50Q96LR7 162 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 COL4A4P53420 1690 aaPredicted RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 H3BQ15 152 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 RPL7P18124 248 aaKnown RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 SLC19A1P41440 591 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 SMAGPQ0VAQ4 97 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 TMEM241Q24JQ0 296 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 SOX7Q9BT81 388 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 ZNF337Q9Y3M9 751 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 A0A1B0GW15 77 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 GLRA1P23415 457 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 ZNF628Q5EBL2 1059 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 ZNF626Q68DY1 528 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 ZMAT3Q9HA38 289 aaKnown RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 GPR55Q9Y2T6 319 aaPredicted RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 V9GYH0 126 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 KCNE1BA0A087WTH5 132 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 HRO43593 1189 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 PRKRAO75569 313 aaKnown RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 HOXC4P09017 264 aaPredicted RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 HTR1DP28221 377 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 UQCRFS1P47985 274 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 UBALD2Q8IYN6 164 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 SLC38A5Q8WUX1 472 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 UBE2FQ969M7 185 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 VWCEQ96DN2 955 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 TCTN2Q96GX1 697 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 LTB4R2Q9NPC1 389 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 SLC2A8Q9NY64 477 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 PEF1Q9UBV8 284 aaKnown RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 RAB22AQ9UL26 194 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 SOX21Q9Y651 276 aaPredicted RBP5.93□□□□□ -1.46
CHD6-203ENST00000373233 MCRIP1C9JLW8 97 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 DRD3P35462 400 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 EMP1P54849 157 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 CKS1BP61024 79 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 CTAG1AP78358 180 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 DHRS2Q13268 280 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 COX20Q5RI15 118 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 FAM169BQ8N8A8 192 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 OR6N1Q8NGY5 312 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 OR5R1Q8NH85 324 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 CYSLTR2Q9NS75 346 aa5.93□□□□□ -1.46
CHD6-203ENST00000373233 GABRA1P14867 456 aa5.92□□□□□ -1.46
CHD6-203ENST00000373233 FAM3BP58499 235 aaPredicted RBP5.92□□□□□ -1.46
CHD6-203ENST00000373233 NIT1Q86X76 327 aa5.92□□□□□ -1.46
CHD6-203ENST00000373233 EDAQ92838 391 aa5.92□□□□□ -1.46
CHD6-203ENST00000373233 TMPRSS13Q9BYE2 586 aa5.92□□□□□ -1.46
CHD6-203ENST00000373233 STRADBQ9C0K7 418 aa5.92□□□□□ -1.46
CHD6-203ENST00000373233 ZNF256Q9Y2P7 627 aaPredicted RBP5.92□□□□□ -1.46
CHD6-203ENST00000373233 ICOSLGO75144 302 aa5.92□□□□□ -1.46
CHD6-203ENST00000373233 CER1O95813 267 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms