RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 RTL6Q6ICC9 239 aa11.15□□□□□ -0.62
CTPS1-202ENST00000372621 HAGHLQ6PII5 290 aaPredicted RBP11.15□□□□□ -0.62
CTPS1-202ENST00000372621 C6orf201Q7Z4U5 140 aa11.15□□□□□ -0.62
CTPS1-202ENST00000372621 Q96M66 194 aa11.15□□□□□ -0.62
CTPS1-202ENST00000372621 CNTNAP3Q9BZ76 1288 aa11.15□□□□□ -0.62
CTPS1-202ENST00000372621 OR2S2Q9NQN1 319 aa11.15□□□□□ -0.62
CTPS1-202ENST00000372621 FOXD3Q9UJU5 478 aaPredicted RBP11.15□□□□□ -0.62
CTPS1-202ENST00000372621 KNG1P01042 644 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 CYC1P08574 325 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 ECI1P42126 302 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 TMEM268Q5VZI3 342 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 SPEM1Q8N4L4 309 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 SEMA6DQ8NFY4 1073 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 PIGQQ9BRB3 760 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 RHOFQ9HBH0 211 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 C1orf123Q9NWV4 160 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 PLA2G2EQ9NZK7 142 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 GSKIPQ9P0R6 139 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 RCC2Q9P258 522 aaKnown RBP11.14□□□□□ -0.63
CTPS1-202ENST00000372621 TUBD1Q9UJT1 453 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 C14orf166Q9Y224 244 aaKnown RBP11.14□□□□□ -0.63
CTPS1-202ENST00000372621 ZNF175Q9Y473 711 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 WDR87Q6ZQQ6 2873 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 H7C2Y5 167 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 TP53I11O14683 189 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 SNAPINO95295 136 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 LPAR6P43657 344 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 NPBWR1P48145 328 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 SUCLG1P53597 346 aaKnown RBP11.14□□□□□ -0.63
CTPS1-202ENST00000372621 RPUSD3Q6P087 351 aaKnown RBP11.14□□□□□ -0.63
CTPS1-202ENST00000372621 PPP1R3BQ86XI6 285 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 LRRC18Q8N456 261 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 PIGTQ969N2 578 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 CCDC74BQ96LY2 380 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 NRIP2Q9BQI9 281 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 TAF9BQ9HBM6 251 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 PROK2Q9HC23 129 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 MEMO1Q9Y316 297 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 LOC102723996A0A087X1L8 192 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 CRYM-AS1A6NIL9 109 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 LRP3O75074 770 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 CTSDP07339 412 aaPredicted RBP11.14□□□□□ -0.63
CTPS1-202ENST00000372621 DBHP09172 617 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 MUC1P15941 1255 aaPredicted RBP11.14□□□□□ -0.63
CTPS1-202ENST00000372621 GUCA1AP43080 201 aaPredicted RBP11.14□□□□□ -0.63
CTPS1-202ENST00000372621 S100A10P60903 97 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 OR2A2Q6IF42 318 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 CCDC54Q8NEL0 328 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 ZNF2Q9BSG1 426 aaPredicted RBP11.14□□□□□ -0.63
CTPS1-202ENST00000372621 HRH4Q9H3N8 390 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 TREM1Q9NP99 234 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 FAM96BQ9Y3D0 163 aa11.14□□□□□ -0.63
CTPS1-202ENST00000372621 IGHV3-15A0A0B4J1V0 119 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 M0R135 149 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 DHHO43323 396 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 CELA2AP08217 269 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 RCC1P18754 421 aaPredicted RBP11.13□□□□□ -0.63
CTPS1-202ENST00000372621 SULT1A2P50226 295 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 RSPO4Q2I0M5 234 aaPredicted RBP11.13□□□□□ -0.63
CTPS1-202ENST00000372621 SNAI3Q3KNW1 292 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 BTNL8Q6UX41 500 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 SULF2Q8IWU5 870 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 SPAG16Q8N0X2 631 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 SGK3Q96BR1 496 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 FBXO17Q96EF6 278 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 ZNF799Q96GE5 643 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 UCN2Q96RP3 112 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 HDHD3Q9BSH5 251 aaPredicted RBP11.13□□□□□ -0.63
CTPS1-202ENST00000372621 LIME1Q9H400 295 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 ZNF701Q9NV72 531 aaPredicted RBP11.13□□□□□ -0.63
CTPS1-202ENST00000372621 PI4KAP42356 2102 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 ZIC3O60481 467 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 EIF1BO60739 113 aaKnown RBP11.13□□□□□ -0.63
CTPS1-202ENST00000372621 DEDDO75618 318 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 VAMP5O95183 116 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 CD5P06127 495 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 HEXAP06865 529 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 SFTPBP07988 381 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 FCGR3AP08637 254 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 EPHA8P29322 1005 aaPredicted RBP11.13□□□□□ -0.63
CTPS1-202ENST00000372621 EIF5AP63241 154 aaKnown RBP11.13□□□□□ -0.63
CTPS1-202ENST00000372621 IAH1Q2TAA2 248 aaPredicted RBP11.13□□□□□ -0.63
CTPS1-202ENST00000372621 ZIC4Q8N9L1 334 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 OR9K2Q8NGE7 335 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 S100A13Q99584 98 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 FAM157AC9JC47 383 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 K7ESF4 209 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 MTRF1O75570 445 aaKnown RBP11.13□□□□□ -0.63
CTPS1-202ENST00000372621 CST4P01036 141 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 IGFBP4P22692 258 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 RBMXP38159 391 aaKnown RBP11.13□□□□□ -0.63
CTPS1-202ENST00000372621 DUSP23Q9BVJ7 150 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 ANGPTL4Q9BY76 406 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 PLEKHJ1Q9NW61 149 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 OCIAD1Q9NX40 245 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 ANXA10Q9UJ72 324 aa11.13□□□□□ -0.63
CTPS1-202ENST00000372621 GAPDHP04406 335 aaKnown RBP11.12□□□□□ -0.63
CTPS1-202ENST00000372621 PVALBP20472 110 aaPredicted RBP11.12□□□□□ -0.63
CTPS1-202ENST00000372621 CRYGSP22914 178 aa11.12□□□□□ -0.63
CTPS1-202ENST00000372621 GABRR1P24046 479 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms