RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CMBLQ96DG6 245 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 PARP12Q9H0J9 701 aaKnown RBP11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 PLEKHF2Q9H8W4 249 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 FCGR2CP31995 323 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 SCAND1P57086 179 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 UBE2G2P60604 165 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 EGR3Q06889 387 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 RPL18Q07020 188 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 PTOV1Q86YD1 416 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 SCCPDHQ8NBX0 429 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR4C12Q96R67 309 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 C5orf49A4QMS7 147 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 NXPH3O95157 252 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 ALOX5APP20292 161 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 AVPR2P30518 371 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 ZNF92Q03936 586 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 CLLU1Q5K131 121 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 MFSD4AQ8N468 514 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 ARIH2OSQ8N7S6 290 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 LINC01555Q8NAE3 123 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 INTS12Q96CB8 462 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR5V1Q9UGF6 321 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 KCNE1BA0A087WTH5 132 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR8U8P0C7N1 319 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 TBPP20226 339 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 GLRA1P23415 457 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 SSBP1Q04837 148 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 JMJD6Q6NYC1 403 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 SPNS2Q8IVW8 549 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR13D1Q8NGV5 346 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 CT55Q8WUE5 264 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 PLEKHA2Q9HB19 425 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 BCL2L11O43521 198 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 CLN3Q13286 438 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 CDK5R1Q15078 307 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 PWWP2BQ6NUJ5 590 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 KISS1RQ969F8 398 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 TMEM208Q9BTX3 173 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 BANF2Q9H503 90 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 TMEM231Q9H6L2 316 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 ANKRD12Q6UB98 2062 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 MMP15P51511 669 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 TAS2R60P59551 318 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 TGIF2LXQ8IUE1 241 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 BAP18Q8IXM2 172 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 NUDT11Q96G61 164 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 MS4A10Q96PG2 267 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 PTDSS2Q9BVG9 487 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 S1PR5Q9H228 398 aa11.97□□□□□ -0.49
RAPGEF1-201ENST00000372189 EPHA2P29317 976 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 AMTP48728 403 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 TNFRSF14Q92956 283 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 SLAMF6Q96DU3 332 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 LHX9Q9NQ69 397 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 MMP24Q9Y5R2 645 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 SPINT2O43291 252 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 ZIC2O95409 532 aaPredicted RBP11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 CD99P14209 185 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 ACKR3P25106 362 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 ABCD3P28288 659 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 ASCL1P50553 236 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 BARHL1Q9BZE3 327 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 KCNG2Q9UJ96 466 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 SBF2Q86WG5 1849 aa11.96□□□□□ -0.49
RAPGEF1-201ENST00000372189 TRAV1-2A0A0B4J238 106 aa11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 RHBDL1O75783 438 aa11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 KLRB1Q12918 225 aa11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 ACER2Q5QJU3 275 aa11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 SLIRPQ9GZT3 109 aaKnown RBP11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 MED9Q9NWA0 146 aa11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 KIR2DS1A0A191URI9 304 aa11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 RPL12P30050 165 aaKnown RBP11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 KIR2DS4P43632 304 aa11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 SNRPNP63162 240 aaKnown RBP11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF85Q03923 595 aa11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 KIR2DS1Q14954 304 aa11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 RIPPLY2Q5TAB7 128 aa11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 RPUSD3Q6P087 351 aaKnown RBP11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 LYG2Q86SG7 212 aa11.96□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR5H15A6NDH6 313 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR4C46A6NHA9 309 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR5H1A6NKK0 313 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 FABP2P12104 132 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 NDUFB7P17568 137 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 EDDM3AQ14507 147 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 GPR87Q9BY21 358 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 OCIAD1Q9NX40 245 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 KIAA1217Q5T5P2 1943 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 A0A0B4J293 547 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 PATE3B3GLJ2 98 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 E5RGE8 158 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 CTXN2P0C2S0 81 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 MPGP29372 298 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 ELLP55199 621 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 UBE2MP61081 183 aaKnown RBP11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 AESQ08117 197 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 TMEM267Q0VDI3 215 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 FAAP20Q6NZ36 180 aa11.95□□□□□ -0.5
RAPGEF1-201ENST00000372189 FAM71CQ8NEG0 241 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms