RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SFT2D1Q8WV19 159 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 AUNIPQ9H7T9 357 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 NPIPB8E9PQR5 432 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 SSSCA1O60232 199 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 RPS2P15880 293 aaKnown RBP13.07□□□□□ -0.32
NDC1-201ENST00000371429 COX7A1P24310 79 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 PRSS12P56730 875 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 BTNL3Q6UXE8 466 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 ZNF441Q8N8Z8 693 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 YIPF6Q96EC8 236 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 GMPPAQ96IJ6 420 aaPredicted RBP13.07□□□□□ -0.32
NDC1-201ENST00000371429 GAL3ST2Q9H3Q3 398 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 NPAP1Q9NZP6 1156 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 DNPH1O43598 174 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 IAPPP10997 89 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 DTYMKP23919 212 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 ACKR3P25106 362 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 MAMSTRQ6ZN01 415 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 PTP4A1Q93096 173 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 ZNF275Q9NSD4 429 aaPredicted RBP13.06□□□□□ -0.32
NDC1-201ENST00000371429 PCYT1BQ9Y5K3 369 aaPredicted RBP13.06□□□□□ -0.32
NDC1-201ENST00000371429 ZFP92A6NM28 416 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 MGST1P10620 155 aaKnown RBP13.06□□□□□ -0.32
NDC1-201ENST00000371429 SOHLH1Q5JUK2 328 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 DRAXINQ8NBI3 349 aaPredicted RBP13.06□□□□□ -0.32
NDC1-201ENST00000371429 C17orf47Q8NEP4 570 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 OR8D4Q8NGM9 314 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 CLDN23Q96B33 292 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 PFDN5Q99471 154 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 CYSLTR2Q9NS75 346 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 CSAG2Q9Y5P2 127 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 ARID1AO14497 2285 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 AKR7A2O43488 359 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 CELA2AP08217 269 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 ANKRD34CP0C6C1 535 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 LIMS3P0CW19 117 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 LIMS4P0CW20 117 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 FBXW9Q5XUX1 488 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 OR2W3Q7Z3T1 314 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 SAP30LQ9HAJ7 183 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 TRAV38-1A0A0B4J264 116 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 GPR31O00270 319 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 PLPP2O43688 288 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 AQP8O94778 261 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 ZFP36L2P47974 494 aaKnown RBP13.06□□□□□ -0.32
NDC1-201ENST00000371429 FBXW5Q969U6 566 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 GPR35Q9HC97 309 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 KLK11Q9UBX7 282 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 CES1P1Q9UKY3 287 aa13.06□□□□□ -0.32
NDC1-201ENST00000371429 PCM1Q15154 2024 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 CDC20Q12834 499 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 KRTCAP3Q53RY4 240 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 TERB2Q8NHR7 220 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 MS4A5Q9H3V2 200 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 PURGQ9UJV8 347 aaKnown RBP13.05□□□□□ -0.32
NDC1-201ENST00000371429 PILRAQ9UKJ1 303 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 ZNF318Q5VUA4 2279 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 IGKV1-8A0A0C4DH67 115 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 A0A1W2PQM1 296 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 LNP1A1A4G5 178 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 ATXN7O15265 892 aaPredicted RBP13.05□□□□□ -0.32
NDC1-201ENST00000371429 IGHA2P01877 340 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 ZNF17P17021 662 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 F2RP25116 425 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 CSF2RBP32927 897 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 SNRPNP63162 240 aaKnown RBP13.05□□□□□ -0.32
NDC1-201ENST00000371429 SSBP1Q04837 148 aaKnown RBP13.05□□□□□ -0.32
NDC1-201ENST00000371429 CSRP2Q16527 193 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 MESTQ5EB52 335 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 DDOQ99489 341 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 BIN3Q9NQY0 253 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 SCN10AQ9Y5Y9 1956 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 A0A1B0GVG6 124 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 DEFB108AA8MXU0 73 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 FUCA1P04066 466 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 CST2P09228 141 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 NHLRC1Q6VVB1 395 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 C17orf107Q6ZR85 190 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 MFSD4AQ8N468 514 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 ARRDC1Q8N5I2 433 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 TAF9BQ9HBM6 251 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 CEACAM6P40199 344 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 UBE2MP61081 183 aaKnown RBP13.05□□□□□ -0.32
NDC1-201ENST00000371429 PMP22Q01453 160 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 HIKESHIQ53FT3 197 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 ARHGAP5-AS1Q96IT6 56 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 NMES1Q9C002 83 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 MAGT1Q9H0U3 335 aa13.05□□□□□ -0.32
NDC1-201ENST00000371429 IGHV1-45A0A0A0MS14 117 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 A0A1W2PR77 199 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 SMLR1H3BR10 107 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 OR4E1P0C645 316 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 GUCA2AQ02747 115 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 C15orf54Q8N8G6 183 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 FAM181AQ8N9Y4 354 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 SMIM4Q8WVI0 70 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 LIN37Q96GY3 246 aaPredicted RBP13.04□□□□□ -0.32
NDC1-201ENST00000371429 ICAM5Q9UMF0 924 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 KRASP01116 189 aa13.04□□□□□ -0.32
NDC1-201ENST00000371429 PSMB6P28072 239 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms