RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 CD300LDQ6UXZ3 194 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 SCD5Q86SK9 330 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 BPIFA4PQ86YQ2 179 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 SUMF1Q8NBK3 374 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 OR5B3Q8NH48 314 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 RNASE8Q8TDE3 154 aaKnown RBP9.36□□□□□ -0.91
PRDM1-201ENST00000369089 GPA33Q99795 319 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.36□□□□□ -0.91
PRDM1-201ENST00000369089 PLEKHJ1Q9NW61 149 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 B3GAT1Q9P2W7 334 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 LEFTY2O00292 366 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 SLC31A1O15431 190 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 CTAG2O75638 210 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 GPR3P46089 330 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 IHHQ14623 411 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 CARD17Q5XLA6 110 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 C22orf39Q6P5X5 142 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 TSEN54Q7Z6J9 526 aaKnown RBP9.36□□□□□ -0.91
PRDM1-201ENST00000369089 RNF175Q8N4F7 328 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 DTWD2Q8NBA8 298 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 OR5D14Q8NGL3 314 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 MUCL1Q96DR8 90 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 ELOVL3Q9HB03 270 aa9.36□□□□□ -0.91
PRDM1-201ENST00000369089 DDX60LQ5H9U9 1706 aaKnown RBP9.36□□□□□ -0.91
PRDM1-201ENST00000369089 TRBV5-3A0A0A0MS03 114 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 ERI3O43414 337 aaKnown RBP9.35□□□□□ -0.91
PRDM1-201ENST00000369089 MMP9P14780 707 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 MST1P26927 711 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 TM4SF4P48230 202 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 HIKESHIQ53FT3 197 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 VASH2Q86V25 355 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 GBGT1Q8N5D6 347 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 C17orf47Q8NEP4 570 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 OR5A2Q8NGI9 324 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 AQP10Q96PS8 301 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 MESP1Q9BRJ9 268 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 PCGF1Q9BSM1 259 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 PLEKHF2Q9H8W4 249 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 SLC52A3Q9NQ40 469 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 ZNF107Q9UII5 783 aaPredicted RBP9.35□□□□□ -0.91
PRDM1-201ENST00000369089 NPIPB8E9PQR5 432 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 BMPR1BO00238 502 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 PHF1O43189 567 aaPredicted RBP9.35□□□□□ -0.91
PRDM1-201ENST00000369089 HCRTR1O43613 425 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 DPP4P27487 766 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 CEACAM8P31997 349 aaPredicted RBP9.35□□□□□ -0.91
PRDM1-201ENST00000369089 MDH2P40926 338 aaKnown RBP9.35□□□□□ -0.91
PRDM1-201ENST00000369089 ID4P47928 161 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 ACKR1Q16570 336 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 GCM1Q9NP62 436 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 ZNF835Q9Y2P0 537 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 C4orf47A7E2U8 309 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 SRP14P37108 136 aaKnown RBP9.35□□□□□ -0.91
PRDM1-201ENST00000369089 PPOXP50336 477 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 CTXN1P60606 82 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 PDGFRLQ15198 375 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 KMT5CQ86Y97 462 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 KCNG3Q8TAE7 436 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 ALG12Q9BV10 488 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 TMEM59Q9BXS4 323 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 URB1O60287 2271 aaKnown RBP9.35□□□□□ -0.91
PRDM1-201ENST00000369089 C17orf112F2Z3M2 114 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 NDUFS4O43181 175 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 FURINP09958 794 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 FGF8P55075 233 aaPredicted RBP9.35□□□□□ -0.91
PRDM1-201ENST00000369089 UCP3P55916 312 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 TMEM255AQ5JRV8 349 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 PECRQ9BY49 303 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 MYO7AQ13402 2215 aa9.35□□□□□ -0.91
PRDM1-201ENST00000369089 TEX50A0A1B0GTY4 177 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 SLC17A2O00624 439 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 TAPBPO15533 448 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 SELEP16581 610 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 SRSF5Q13243 272 aaKnown RBP9.34□□□□□ -0.91
PRDM1-201ENST00000369089 BRICD5Q6PL45 260 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 KLK6Q92876 244 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 RERGQ96A58 199 aaPredicted RBP9.34□□□□□ -0.91
PRDM1-201ENST00000369089 CXCL16Q9H2A7 254 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 CXorf36Q9H7Y0 433 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 CGGBP1Q9UFW8 167 aaPredicted RBP9.34□□□□□ -0.91
PRDM1-201ENST00000369089 TRAPPC2LQ9UL33 140 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 ZNF816-ZNF321PA0A0X1KG74 233 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 CLEC18AA5D8T8 446 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 RNF222A6NCQ9 220 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 HMGN2P05204 90 aaKnown RBP9.34□□□□□ -0.91
PRDM1-201ENST00000369089 CD5P06127 495 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 PNLIPP16233 465 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 P2RY1P47900 373 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 COX19Q49B96 90 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 FIGLAQ6QHK4 219 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.34□□□□□ -0.91
PRDM1-201ENST00000369089 TAS1R1Q7RTX1 841 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 AMZ2Q86W34 360 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 CBARPQ8N350 705 aaPredicted RBP9.34□□□□□ -0.91
PRDM1-201ENST00000369089 CLEC18CQ8NCF0 446 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 OR4X1Q8NH49 305 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 TMEM255BQ8WV15 326 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 HOXB13Q92826 284 aaPredicted RBP9.34□□□□□ -0.91
PRDM1-201ENST00000369089 ATP6V0BQ99437 205 aa9.34□□□□□ -0.91
PRDM1-201ENST00000369089 ELOVL2Q9NXB9 296 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms