RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 AGPAT2O15120 278 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 LMX1BO60663 402 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 IGHG1P01857 330 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 S100A8P05109 93 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 FBP1P09467 338 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 CPN1P15169 458 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 CRABP1P29762 137 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 RAC1P63000 192 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 SSX9Q7RTT3 188 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 GGNQ86UU5 652 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 SLC26A10Q8NG04 563 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 RYDENQ9NUL5 291 aaKnown RBP9.36□□□□□ -0.91
TPM3-212ENST00000368533 VSX1Q9NZR4 365 aaPredicted RBP9.36□□□□□ -0.91
TPM3-212ENST00000368533 BOKQ9UMX3 212 aaPredicted RBP9.36□□□□□ -0.91
TPM3-212ENST00000368533 HDGFL3Q9Y3E1 203 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 CXorf65A6NEN9 183 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 AQP8O94778 261 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 H2BFMP0C1H6 154 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 PGA4P0DJD7 388 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 PGA3P0DJD8 388 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 DAOP14920 347 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 PEA15Q15121 130 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 TAF13Q15543 124 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 CD163Q86VB7 1156 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 OR10R2Q8NGX6 335 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 SLC25A43Q8WUT9 341 aaPredicted RBP9.36□□□□□ -0.91
TPM3-212ENST00000368533 ASB5Q8WWX0 329 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 OXGR1Q96P68 337 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 ZNF703Q9H7S9 590 aaPredicted RBP9.36□□□□□ -0.91
TPM3-212ENST00000368533 HHLA2Q9UM44 414 aa9.36□□□□□ -0.91
TPM3-212ENST00000368533 ADGRG4Q8IZF6 3080 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 LOC107986453A0A1B0GWG9 222 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 OR5H15A6NDH6 313 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 WRBO00258 174 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 ETV2O00321 342 aaPredicted RBP9.35□□□□□ -0.91
TPM3-212ENST00000368533 CYB5AP00167 134 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 SP1P08047 785 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 LAP3P28838 519 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 OR52W1Q6IF63 320 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 NOXO1Q8NFA2 376 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 OR9K2Q8NGE7 335 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 OR52N5Q8NH56 324 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 FNDC9Q8TBE3 224 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 VRK1Q99986 396 aaPredicted RBP9.35□□□□□ -0.91
TPM3-212ENST00000368533 FAM173AQ9BQD7 235 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 PIGMQ9H3S5 423 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 POFUT1Q9H488 388 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 A0A1B0GW55 424 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 TMEM235A6NFC5 223 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 SNRPGP15A8MWD9 76 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 IL5P05113 134 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 DUX4L2P0CJ85 424 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 DUX4L3P0CJ86 424 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 DUX4L4P0CJ87 422 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 DUX4L5P0CJ88 424 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 DUX4L6P0CJ89 424 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 DUX4L7P0CJ90 424 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 LIN54Q6MZP7 749 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 BIVMQ86UB2 503 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 FAM219AQ8IW50 185 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 GABRG1Q8N1C3 465 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 THRSPQ92748 146 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 SOX7Q9BT81 388 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 CALHM2Q9HA72 323 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 DUX4Q9UBX2 424 aa9.35□□□□□ -0.91
TPM3-212ENST00000368533 TLN1Q9Y490 2541 aaKnown RBP9.35□□□□□ -0.91
TPM3-212ENST00000368533 A0A087WZY1 265 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 KANTRA0A1W2PQU2 76 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 A6NIZ1 184 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 ZNF729A6NN14 1252 aaPredicted RBP9.34□□□□□ -0.91
TPM3-212ENST00000368533 F5H0A9 414 aaPredicted RBP9.34□□□□□ -0.91
TPM3-212ENST00000368533 EFSO43281 561 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 ZNF14P17017 642 aaPredicted RBP9.34□□□□□ -0.91
TPM3-212ENST00000368533 ACTBP60709 375 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 RAP1BP61224 184 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 RAP1AP62834 184 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 ACTG1P63261 375 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 ZP4Q12836 540 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 CLN3Q13286 438 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 TSC22D1Q15714 1073 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 ZNF766Q5HY98 468 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 KRBOX4Q5JUW0 171 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 OR4S1Q8NGB4 309 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 GTF3AQ92664 365 aaKnown RBP9.34□□□□□ -0.91
TPM3-212ENST00000368533 FGGYQ96C11 551 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 SEBOXQ9HB31 216 aaPredicted RBP9.34□□□□□ -0.91
TPM3-212ENST00000368533 CHMP1AQ9HD42 196 aaPredicted RBP9.34□□□□□ -0.91
TPM3-212ENST00000368533 OR52A1Q9UKL2 312 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 hCG_1809904A0A1W2PP81 198 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 A0A1W2PR64 198 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 A0A1W2PRV1 198 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 UBE2CO00762 179 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 TMEM127O75204 238 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 MGMTP16455 207 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 CSNK1A1P48729 337 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 JMJD6Q6NYC1 403 aaPredicted RBP9.34□□□□□ -0.91
TPM3-212ENST00000368533 DNM1P34Q6PK57 102 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 KLHL24Q6TFL4 600 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 OR4A4PQ8NGN8 299 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 GGACTQ9BVM4 153 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms