RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FUT6P51993 359 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 GP2P55259 537 aaKnown RBP11.71□□□□□ -0.53
TPM3-211ENST00000368531 MTCP1P56278 107 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 PPP3R1P63098 170 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 FABP5Q01469 135 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 ASPHD2Q6ICH7 369 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 UNQ9370/PRO34162Q6UXP9 181 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 RNF144BQ7Z419 303 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 PEG10Q86TG7 708 aaKnown RBP11.71□□□□□ -0.53
TPM3-211ENST00000368531 SATL1Q86VE3 508 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 BATF2Q8N1L9 274 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 LRRC29Q8WV35 223 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 MUL1Q969V5 352 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 TECTBQ96PL2 329 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 NKX3-1Q99801 234 aaPredicted RBP11.71□□□□□ -0.53
TPM3-211ENST00000368531 BPESC1Q9GZL8 116 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 RNF7Q9UBF6 113 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 IGKV1-27A0A075B6S5 117 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 ISPDA4D126 451 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 MAGEA13PA6NCF6 341 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 GABRPO00591 440 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 SYNGR1O43759 233 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 RGS9O75916 674 aaPredicted RBP11.7□□□□□ -0.54
TPM3-211ENST00000368531 PTBP3O95758 552 aaKnown RBP11.7□□□□□ -0.54
TPM3-211ENST00000368531 GIFP27352 417 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 MAPK3P27361 379 aaPredicted RBP11.7□□□□□ -0.54
TPM3-211ENST00000368531 GABRA5P31644 462 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 CD80P33681 288 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 POU3F4P49335 361 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 RBP2P50120 134 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 ATP1B3P54709 279 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 TMEM33P57088 247 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 RIN1Q13671 783 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 TRAM1Q15629 374 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 SYT6Q5T7P8 510 aaPredicted RBP11.7□□□□□ -0.54
TPM3-211ENST00000368531 SFRP4Q6FHJ7 346 aaPredicted RBP11.7□□□□□ -0.54
TPM3-211ENST00000368531 WDR82Q6UXN9 313 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 TMEM91Q6ZNR0 172 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 DNM1P46Q6ZS02 220 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 ZNF573Q86YE8 665 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 CALHM1Q8IU99 346 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 MAPK1IP1LQ8NDC0 245 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 DEFB108BQ8NET1 73 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 HPS1Q92902 700 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 RAB1CQ92928 201 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 ERGIC1Q969X5 290 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 TIMD4Q96H15 378 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 NDUFB11Q9NX14 153 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 CKLFQ9UBR5 152 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 WIPI2Q9Y4P8 454 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 NPTNQ9Y639 398 aa11.7□□□□□ -0.54
TPM3-211ENST00000368531 ITPR2Q14571 2701 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 FLNBO75369 2602 aaKnown RBP11.69□□□□□ -0.54
TPM3-211ENST00000368531 IGHV3OR15-7A0A075B7D8 119 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 NDUFS8O00217 210 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 WNT9BO14905 357 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 MAGEB3O15480 346 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 AKR7A2O43488 359 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 MAS1P04201 325 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 EGR1P18146 543 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 PSMA1P25786 263 aaKnown RBP11.69□□□□□ -0.54
TPM3-211ENST00000368531 NR4A2P43354 598 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 FAM76BQ5HYJ3 339 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 LHFPL2Q6ZUX7 228 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 C1orf87Q8N0U7 546 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 DNAAF1Q8NEP3 725 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 OR52N4Q8NGI2 321 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 OR5D18Q8NGL1 313 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 ZNF671Q8TAW3 534 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 Q8TCH9 128 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 AQP3Q92482 292 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 THRSPQ92748 146 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 SPSB1Q96BD6 273 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 ZNF488Q96MN9 340 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 GPER1Q99527 375 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 TLNRD1Q9H1K6 362 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 PPIL3Q9H2H8 161 aaKnown RBP11.69□□□□□ -0.54
TPM3-211ENST00000368531 NEK6Q9HC98 313 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 TCF7L1Q9HCS4 588 aa11.69□□□□□ -0.54
TPM3-211ENST00000368531 EXOSC4Q9NPD3 245 aaKnown RBP11.69□□□□□ -0.54
TPM3-211ENST00000368531 PPIAL4EA0A075B759 164 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 TRIM64CA6NLI5 447 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 VWC2LB2RUY7 222 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 PPIAL4DF5H284 164 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 J3QT63 122 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 IFNL4K9M1U5 179 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 SMAD7O15105 426 aaKnown RBP11.68□□□□□ -0.54
TPM3-211ENST00000368531 SPRY1O43609 319 aaPredicted RBP11.68□□□□□ -0.54
TPM3-211ENST00000368531 PPIAL4FP0DN26 164 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 CD36P16671 472 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 JUNBP17275 347 aaPredicted RBP11.68□□□□□ -0.54
TPM3-211ENST00000368531 IGFBP3P17936 291 aaPredicted RBP11.68□□□□□ -0.54
TPM3-211ENST00000368531 BDKRB2P30411 391 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 ZMYND11Q15326 602 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 KISS1Q15726 138 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 ZNF181Q2M3W8 571 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 HSD17B12Q53GQ0 312 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 DDI2Q5TDH0 399 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 ZNF529Q6P280 563 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms