RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 MIXL1Q9H2W2 232 aa10.9□□□□□ -0.66
PTPRK-203ENST00000368207 ANK1P16157 1881 aa10.9□□□□□ -0.66
PTPRK-203ENST00000368207 NDUFB6O95139 128 aa10.9□□□□□ -0.67
PTPRK-203ENST00000368207 SEMG1P04279 462 aa10.9□□□□□ -0.67
PTPRK-203ENST00000368207 MLF1P58340 268 aa10.9□□□□□ -0.67
PTPRK-203ENST00000368207 SSBP1Q04837 148 aaKnown RBP10.9□□□□□ -0.67
PTPRK-203ENST00000368207 CDH26Q8IXH8 852 aa10.9□□□□□ -0.67
PTPRK-203ENST00000368207 OR8U1Q8NH10 309 aa10.9□□□□□ -0.67
PTPRK-203ENST00000368207 TRMT61AQ96FX7 289 aaKnown RBP10.9□□□□□ -0.67
PTPRK-203ENST00000368207 SSX3Q99909 188 aa10.9□□□□□ -0.67
PTPRK-203ENST00000368207 TMPRSS13Q9BYE2 586 aa10.9□□□□□ -0.67
PTPRK-203ENST00000368207 ZNF355PQ9NSJ1 428 aa10.9□□□□□ -0.67
PTPRK-203ENST00000368207 C17orf51A8MQB3 221 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 DCTN6O00399 190 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 SSSCA1O60232 199 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 EFEMP2O95967 443 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 LIMS1P48059 325 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 ELLP55199 621 aaPredicted RBP10.89□□□□□ -0.67
PTPRK-203ENST00000368207 NKX6-1P78426 367 aaPredicted RBP10.89□□□□□ -0.67
PTPRK-203ENST00000368207 CD300CQ08708 224 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 PLPPR5Q32ZL2 321 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 SMIM21Q3B7S5 101 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 NLRC3Q7RTR2 1065 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 SVBPQ8N300 66 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 OR2G3Q8NGZ4 309 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 SLC17A5Q9NRA2 495 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 A0A0J9YW62 118 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 LRP5LA4QPB2 252 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 B4E171 279 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 OR2F2O95006 317 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 HPNP05981 417 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 TSPAN7P41732 249 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 OR2F1Q13607 317 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 RFESDQ8TAC1 157 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 USB1Q9BQ65 265 aaKnown RBP10.89□□□□□ -0.67
PTPRK-203ENST00000368207 PDGFAP04085 211 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 RAB11AP62491 216 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 TLE4Q04727 773 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 TMEM128Q5BJH2 165 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 SFT2D1Q8WV19 159 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 YIPF5Q969M3 257 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 OPA3Q9H6K4 179 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 KLHDC2Q9Y2U9 406 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 TGIF1Q15583 401 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 ST3GAL2Q16842 350 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 GLDNQ6ZMI3 551 aaPredicted RBP10.89□□□□□ -0.67
PTPRK-203ENST00000368207 C1orf87Q8N0U7 546 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 CPEB3Q8NE35 698 aaKnown RBP10.89□□□□□ -0.67
PTPRK-203ENST00000368207 SLC26A10Q8NG04 563 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 SF3B5Q9BWJ5 86 aaKnown RBP10.89□□□□□ -0.67
PTPRK-203ENST00000368207 ESRP2Q9H6T0 727 aaKnown RBP10.89□□□□□ -0.67
PTPRK-203ENST00000368207 ZNF391Q9UJN7 358 aa10.89□□□□□ -0.67
PTPRK-203ENST00000368207 MRPS18BQ9Y676 258 aaKnown RBP10.89□□□□□ -0.67
PTPRK-203ENST00000368207 MED12Q93074 2177 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 MN1Q10571 1320 aaPredicted RBP10.88□□□□□ -0.67
PTPRK-203ENST00000368207 H3BP45 60 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 TIAF1O95411 115 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 RPL12P30050 165 aaKnown RBP10.88□□□□□ -0.67
PTPRK-203ENST00000368207 RPL35P42766 123 aaKnown RBP10.88□□□□□ -0.67
PTPRK-203ENST00000368207 NANOS3P60323 173 aaKnown RBP10.88□□□□□ -0.67
PTPRK-203ENST00000368207 LSM6P62312 80 aaKnown RBP10.88□□□□□ -0.67
PTPRK-203ENST00000368207 SOHLH1Q5JUK2 328 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 OR2W3Q7Z3T1 314 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 WDSUB1Q8N9V3 476 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 CTHRC1Q96CG8 243 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 TIMD4Q96H15 378 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 SBF1O95248 1867 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 ASAH2BP0C7U1 165 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 IAPPP10997 89 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 IL3RAP26951 378 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 ESCO2Q56NI9 601 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 OR2M7Q8NG81 312 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 FBXW5Q969U6 566 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 TECTBQ96PL2 329 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 RPH3ALQ9UNE2 315 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 HS3ST3B1Q9Y662 390 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 CHD5Q8TDI0 1954 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 PATJQ8NI35 1801 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 TTC28Q96AY4 2481 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 KRBOX1C9JBD0 128 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 C17orf112F2Z3M2 114 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 CDC14BO60729 498 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 APOA2P02652 100 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 UBE2KP61086 200 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 SNTB1Q13884 538 aaKnown RBP10.88□□□□□ -0.67
PTPRK-203ENST00000368207 RBPMSQ93062 196 aaKnown RBP10.88□□□□□ -0.67
PTPRK-203ENST00000368207 DFFBO76075 338 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 HBE1P02100 147 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 ZNF92Q03936 586 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 C11orf91Q3C1V1 193 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 FAM74A1Q5RGS3 127 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 ASB5Q8WWX0 329 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 C2orf50Q96LR7 162 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 ROS1P08922 2347 aa10.88□□□□□ -0.67
PTPRK-203ENST00000368207 GMDSO60547 372 aa10.87□□□□□ -0.67
PTPRK-203ENST00000368207 ADRA2CP18825 462 aa10.87□□□□□ -0.67
PTPRK-203ENST00000368207 FHL5Q5TD97 284 aa10.87□□□□□ -0.67
PTPRK-203ENST00000368207 TMEM182Q6ZP80 229 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-203ENST00000368207 CATSPERDQ86XM0 798 aa10.87□□□□□ -0.67
PTPRK-203ENST00000368207 FAM58AQ8N1B3 248 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms