RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 SYNGR1O43759 233 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 XPNPEP2O43895 674 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 FADS2O95864 444 aaKnown RBP12.19□□□□□ -0.46
SF3B5-201ENST00000367569 LHBP01229 141 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 UBCP0CG48 685 aaKnown RBP12.19□□□□□ -0.46
SF3B5-201ENST00000367569 LIMS3P0CW19 117 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 LIMS4P0CW20 117 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 CEBPDP49716 269 aaPredicted RBP12.19□□□□□ -0.46
SF3B5-201ENST00000367569 ETV1P50549 477 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 GTF2A1P52655 376 aaPredicted RBP12.19□□□□□ -0.46
SF3B5-201ENST00000367569 ACTA2P62736 377 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 GNG3P63215 75 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 ACTG2P63267 376 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 SLC34A1Q06495 639 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 RAB40BQ12829 278 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 IKZF1Q13422 519 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 GALEQ14376 348 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 CEACAM21Q3KPI0 293 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 OR2G6Q5TZ20 316 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 TTC23Q5W5X9 447 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 WDR25Q64LD2 544 aaPredicted RBP12.19□□□□□ -0.46
SF3B5-201ENST00000367569 XAF1Q6GPH4 301 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 ST8SIA4Q92187 359 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 ADAT3Q96EY9 351 aaPredicted RBP12.19□□□□□ -0.46
SF3B5-201ENST00000367569 ZNF649Q9BS31 505 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 OR51I2Q9H344 312 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 RNPEPL1Q9HAU8 725 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 ABCB9Q9NP78 766 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 ERVK-18Q9QC07 812 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 OPN4Q9UHM6 478 aa12.19□□□□□ -0.46
SF3B5-201ENST00000367569 A0A0A6YYJ9 748 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 TRAV38-1A0A0B4J264 116 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 OR5B21A6NL26 309 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 H0YHG0 523 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 ATP6V1B1P15313 513 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 ZNF12P17014 697 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 HAAOP46952 286 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 UBE2V2Q15819 145 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 TEX36Q5VZQ5 186 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 TMEM42Q69YG0 159 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 LAIR2Q6ISS4 152 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 C12orf54Q6X4T0 127 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 ZNF841Q6ZN19 808 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 ANGPTL5Q86XS5 388 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 C8orf59Q8N0T1 100 aaPredicted RBP12.18□□□□□ -0.46
SF3B5-201ENST00000367569 ZNF676Q8N7Q3 588 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 SETD9Q8NE22 299 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 OR13C3Q8NGS6 347 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 AQP3Q92482 292 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 ELL3Q9HB65 397 aaPredicted RBP12.18□□□□□ -0.46
SF3B5-201ENST00000367569 PCDHGB1Q9Y5G3 927 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 INSIG2Q9Y5U4 225 aa12.18□□□□□ -0.46
SF3B5-201ENST00000367569 IGKV1-27A0A075B6S5 117 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 IGHV2-70DA0A0C4DH43 119 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 PQLC2LA1A4F0 135 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 OR4C45A6NMZ5 311 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 DVL1O14640 695 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 ZNF20P17024 532 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 AMY2BP19961 511 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 GLRA1P23415 457 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 ALKBH1Q13686 389 aaKnown RBP12.17□□□□□ -0.46
SF3B5-201ENST00000367569 MICBQ29980 383 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 ZBTB37Q5TC79 503 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 STUMQ69YW2 141 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 AHSA2Q719I0 299 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 CALHM1Q8IU99 346 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 ZFP41Q8N8Y5 198 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 ZFAND2BQ8WV99 257 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 RFT1Q96AA3 541 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 PDCD1LG2Q9BQ51 273 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 NUDT16L1Q9BRJ7 211 aaKnown RBP12.17□□□□□ -0.46
SF3B5-201ENST00000367569 VCXQ9H320 206 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 C8orf4Q9NR00 106 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 CLEC2DQ9UHP7 191 aa12.17□□□□□ -0.46
SF3B5-201ENST00000367569 J3QT63 122 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 EPHA1P21709 976 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 CFPP27918 469 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 GABRA2P47869 451 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 PAX2Q02962 417 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 PRB3Q04118 309 aaPredicted RBP12.16□□□□□ -0.46
SF3B5-201ENST00000367569 DOC2BQ14184 412 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 KLHL22Q53GT1 634 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 ARMCX4Q5H9R4 360 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 RNF144BQ7Z419 303 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 C1QL2Q7Z5L3 287 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 SYS1Q8N2H4 156 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 BPIFB6Q8NFQ5 453 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 OR5A2Q8NGI9 324 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 OR13C9Q8NGT0 318 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 ZNF418Q8TF45 676 aaPredicted RBP12.16□□□□□ -0.46
SF3B5-201ENST00000367569 TSEN15Q8WW01 171 aaKnown RBP12.16□□□□□ -0.46
SF3B5-201ENST00000367569 RGP1Q92546 391 aaPredicted RBP12.16□□□□□ -0.46
SF3B5-201ENST00000367569 SLAMF9Q96A28 289 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 FGGYQ96C11 551 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 GAFA1Q96PS6 74 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 SPACA5Q96QH8 159 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 NKX3-1Q99801 234 aaPredicted RBP12.16□□□□□ -0.46
SF3B5-201ENST00000367569 SLC6A7Q99884 636 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 CHST5Q9GZS9 411 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 FGF20Q9NP95 211 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms