RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 ZNF454Q8N9F8 522 aa13.55□□□□□ -0.24
MRPL55-217ENST00000366746 OR5K1Q8NHB7 308 aa13.55□□□□□ -0.24
MRPL55-217ENST00000366746 OTOSQ8NHW6 89 aa13.55□□□□□ -0.24
MRPL55-217ENST00000366746 MMP28Q9H239 520 aa13.55□□□□□ -0.24
MRPL55-217ENST00000366746 RASL12Q9NYN1 266 aa13.55□□□□□ -0.24
MRPL55-217ENST00000366746 LRP12Q9Y561 859 aa13.55□□□□□ -0.24
MRPL55-217ENST00000366746 RFPL4AA6NLU0 287 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 RFPL4AL1F8VTS6 287 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 SLC1A7O00341 560 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 COX7A1P24310 79 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 HABP2Q14520 560 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-217ENST00000366746 MICAQ29983 383 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 HSP90B2PQ58FF3 399 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 CEP78Q5JTW2 689 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 TMEM200BQ69YZ2 307 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 HAGHLQ6PII5 290 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-217ENST00000366746 OR8B12Q8NGG6 310 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 TEX47Q8TBZ9 253 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 CDCA4Q9BXL8 241 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 DGCR6LQ9BY27 220 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 C1orf21Q9H246 121 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 NIPAL2Q9H841 368 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 ZNF702PQ9H963 129 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 SERTAD4Q9NUC0 356 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 AURKAIP1Q9NWT8 199 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-217ENST00000366746 USE1Q9NZ43 259 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 SAMHD1Q9Y3Z3 626 aaKnown RBP13.54□□□□□ -0.24
MRPL55-217ENST00000366746 U3KQV3 271 aa13.54□□□□□ -0.24
MRPL55-217ENST00000366746 VGLL3A8MV65 326 aa13.53□□□□□ -0.24
MRPL55-217ENST00000366746 MTRF1O75570 445 aaKnown RBP13.53□□□□□ -0.24
MRPL55-217ENST00000366746 PSMA6P60900 246 aaKnown RBP13.53□□□□□ -0.24
MRPL55-217ENST00000366746 SPATS1Q496A3 300 aa13.53□□□□□ -0.24
MRPL55-217ENST00000366746 ZBTB37Q5TC79 503 aa13.53□□□□□ -0.24
MRPL55-217ENST00000366746 CYP2R1Q6VVX0 501 aa13.53□□□□□ -0.24
MRPL55-217ENST00000366746 OR4M1Q8NGD0 313 aa13.53□□□□□ -0.24
MRPL55-217ENST00000366746 OR5A2Q8NGI9 324 aa13.53□□□□□ -0.24
MRPL55-217ENST00000366746 OR2T27Q8NH04 317 aa13.53□□□□□ -0.24
MRPL55-217ENST00000366746 AQP3Q92482 292 aa13.53□□□□□ -0.24
MRPL55-217ENST00000366746 PHF21AQ96BD5 680 aa13.53□□□□□ -0.24
MRPL55-217ENST00000366746 REEP1Q9H902 201 aa13.53□□□□□ -0.24
MRPL55-217ENST00000366746 ABCB10Q9NRK6 738 aa13.53□□□□□ -0.24
MRPL55-217ENST00000366746 OR5B21A6NL26 309 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 PRR23D1E9PI22 279 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-217ENST00000366746 H3BN98 237 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 GSC2O15499 205 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 SELENOFO60613 162 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 PRR23D2P0DMB1 279 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-217ENST00000366746 FAHP16930 419 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 PRDX2P32119 198 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 MAGEA2P43356 314 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 RAB13P51153 203 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 ERVFRD-1P60508 538 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 CNN3Q15417 329 aaKnown RBP13.52□□□□□ -0.25
MRPL55-217ENST00000366746 SMIM21Q3B7S5 101 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 PLA1AQ53H76 456 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 DMRTC1Q5HYR2 192 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 ACP7Q6ZNF0 438 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 MOB3CQ70IA8 216 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 KRT77Q7Z794 578 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 COMMD2Q86X83 199 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 Q8N2B8 174 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 ZNF561Q8N587 486 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 C11orf42Q8N5U0 333 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 IQCF1Q8N6M8 205 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 CD177Q8N6Q3 437 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 ITFG2Q969R8 447 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 CITED2Q99967 270 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-217ENST00000366746 PRSS22Q9GZN4 317 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 TCF19Q9Y242 345 aa13.52□□□□□ -0.25
MRPL55-217ENST00000366746 NBEAL2Q6ZNJ1 2754 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 MEGF11A6BM72 1044 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 FAM90A8PA6NJQ4 464 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 CCL3L1P16619 93 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 RIPPLY1Q0D2K3 151 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 ARSJQ5FYB0 599 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-217ENST00000366746 OR2T5Q6IEZ7 315 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 PLBD1Q6P4A8 553 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 C16orf89Q6UX73 402 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 CD300LDQ6UXZ3 194 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 ZNF782Q6ZMW2 699 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-217ENST00000366746 KRT74Q7RTS7 529 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 LHFPL4Q7Z7J7 247 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 DEFB107AQ8IZN7 70 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 OR2T29Q8NH02 315 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 RPS4Y2Q8TD47 263 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 OR5M11Q96RB7 305 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 NDE1Q9NXR1 346 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 ACTR3BQ9P1U1 418 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 PITPNC1Q9UKF7 332 aa13.51□□□□□ -0.25
MRPL55-217ENST00000366746 NOTCH3Q9UM47 2321 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 A0A0U1RQV5 110 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 ACOD1A6NK06 481 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 ARG1P05089 322 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 ATP6V1B1P15313 513 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 CD33P20138 364 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 FOXB2Q5VYV0 432 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 PLCXD3Q63HM9 321 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 CCBE1Q6UXH8 406 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-217ENST00000366746 TMEM219Q86XT9 240 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 CALHM1Q8IU99 346 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms