RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 IKZF1Q13422 519 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZNF829Q3KNS6 432 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 LRRC10Q5BKY1 277 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 DMRTC1Q5HYR2 192 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 CEP78Q5JTW2 689 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZNF684Q5T5D7 378 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 KCTD8Q6ZWB6 473 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 AMIGO2Q86SJ2 522 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZDHHC13Q8IUH4 622 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SLC35F2Q8IXU6 374 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ELMOD2Q8IZ81 293 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 FAM81AQ8TBF8 368 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 LRTOMTQ8WZ04 291 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 HIST1H2AAQ96QV6 131 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 CIB1Q99828 191 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 TTTY10Q9BZA0 68 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 C1RLQ9NZP8 487 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 DNAJB11Q9UBS4 358 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MRM2Q9UI43 246 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 PIGLQ9Y2B2 252 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MAB21L2Q9Y586 359 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 V9GYS6 101 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 RNASEK-C17orf49H0YIS7 233 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 NOS1APO75052 506 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 NDUFA7O95182 113 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 FAHP16930 419 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 GLRA1P23415 457 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 OMGP23515 440 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 GMFBP60983 142 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 RPL15P61313 204 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 FIP1L1Q6UN15 594 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MOB3CQ70IA8 216 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SSX6Q7RTT6 188 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 OR14K1Q8NGZ2 314 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 NPRL2Q8WTW4 380 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SSMEM1Q8WWF3 244 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SDSLQ96GA7 329 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 IL4I1Q96RQ9 567 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 GABARAPL3Q9BY60 117 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MOB1AQ9H8S9 216 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 RASL12Q9NYN1 266 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 H2AFY2Q9P0M6 372 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SLC25A10Q9UBX3 287 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ENPP5Q9UJA9 477 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 IKZF2Q9UKS7 526 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 R4GMQ9 66 aa11.22□□□□□ -0.61
TNFRSF1A-202ENST00000366159 DHRS7CA6NNS2 312 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 DLGAP1O14490 977 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MTRF1O75570 445 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 NRASP01111 189 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 FCGR1AP12314 374 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 CCL1P22362 96 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 C1orf146Q5VVC0 180 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 PLEKHG7Q6ZR37 379 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 THAP5Q7Z6K1 395 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 GID4Q8IVV7 300 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 POC1AQ8NBT0 407 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZNRF1Q8ND25 227 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZNF671Q8TAW3 534 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 DYRK2Q92630 601 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 OSBPL10Q9BXB5 764 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ONECUT1Q9UBC0 465 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 WARS2Q9UGM6 360 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ENOPH1Q9UHY7 261 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 OR52A1Q9UKL2 312 aa11.21□□□□□ -0.61
TNFRSF1A-202ENST00000366159 A0A1B0GUS0 222 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 PQLC2LA1A4F0 135 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 NKX6-3A6NJ46 265 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 E9PQ18 207 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ZNF670-ZNF695F2Z2N8 137 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 LOC110117498-PIK3R3F6TDL0 507 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 M0R1W7 72 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 IGHV4-59P01825 116 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 PGA5P0DJD9 388 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 MPZP25189 248 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 HTR1FP30939 366 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 DLX1P56177 255 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ACTR3P61158 418 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CLVS2Q5SYC1 327 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 PLCXD3Q63HM9 321 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 HCP5Q6MZN7 132 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 HAGHLQ6PII5 290 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ACP7Q6ZNF0 438 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ASRGL1Q7L266 308 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 PDZD9Q8IXQ8 264 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CMTM4Q8IZR5 234 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 OR51G2Q8NGK0 314 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 TBC1D15Q8TC07 691 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 RNF166Q96A37 237 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CENPNQ96H22 339 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 SEMA6AQ9H2E6 1030 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 HES4Q9HCC6 221 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 SIRT7Q9NRC8 400 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 TNFRSF19Q9NS68 423 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 OAZ3Q9UMX2 235 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 SLC22A13Q9Y226 551 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 SNX5Q9Y5X3 404 aa11.2□□□□□ -0.62
TNFRSF1A-202ENST00000366159 A0A1W2PQL4 384 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 SYNGR1O43759 233 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 OR2T7P0C7T2 308 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms