RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SLC35G6P0C7Q6 338 aa1.41□□□□□ -2.18
RNU4-28P-201ENST00000364739 KDSRQ06136 332 aa1.41□□□□□ -2.18
RNU4-28P-201ENST00000364739 MAPRE2Q15555 327 aa1.41□□□□□ -2.18
RNU4-28P-201ENST00000364739 PCOTHQ58A44 107 aa1.41□□□□□ -2.18
RNU4-28P-201ENST00000364739 CENPQQ7L2Z9 268 aaPredicted RBP1.41□□□□□ -2.18
RNU4-28P-201ENST00000364739 RNF10Q8N5U6 811 aaKnown RBP1.41□□□□□ -2.18
RNU4-28P-201ENST00000364739 FANCEQ9HB96 536 aa1.41□□□□□ -2.18
RNU4-28P-201ENST00000364739 ZNF337Q9Y3M9 751 aa1.41□□□□□ -2.18
RNU4-28P-201ENST00000364739 ICOSQ9Y6W8 199 aa1.41□□□□□ -2.18
RNU4-28P-201ENST00000364739 INSRP06213 1382 aa1.41□□□□□ -2.18
RNU4-28P-201ENST00000364739 KCNE1BA0A087WTH5 132 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 MYL12BO14950 172 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 CTAG2O75638 210 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 CXorf1O96002 111 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 PTHP01270 115 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 TRGV3P03979 118 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 C2orf54Q08AI8 447 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 MERTKQ12866 999 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 LGALSLQ3ZCW2 172 aaPredicted RBP1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 LUZP2Q86TE4 346 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 WDR31Q8NA23 367 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 OR1S1Q8NH92 325 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 APH1AQ96BI3 265 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 SLC25A44Q96H78 314 aaPredicted RBP1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 UBE2E2Q96LR5 201 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 C20orf166-AS1Q96NR2 134 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 CHP1Q99653 195 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 TMEM175Q9BSA9 504 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 MCUBQ9NWR8 336 aa1.4□□□□□ -2.19
RNU4-28P-201ENST00000364739 KMT2EQ8IZD2 1858 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 IGLL5B9A064 214 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 KRT14P02533 472 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 CFHR2P36980 270 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 ADIGQ0VDE8 80 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 CUL2Q13617 745 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 ITIH4Q14624 930 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 TRMT10CQ7L0Y3 403 aaKnown RBP1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 MRPL48Q96GC5 212 aaKnown RBP1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 Q96MT0 163 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 CCDC77Q9BR77 488 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 AGMATQ9BSE5 352 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 REEP1Q9H902 201 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 TMEM106BQ9NUM4 274 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 ACOT9Q9Y305 439 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 GBF1Q92538 1859 aa1.39□□□□□ -2.19
RNU4-28P-201ENST00000364739 PLXNA3P51805 1871 aa1.38□□□□□ -2.19
RNU4-28P-201ENST00000364739 PTTG1O95997 202 aa1.38□□□□□ -2.19
RNU4-28P-201ENST00000364739 MRPL2Q5T653 305 aaKnown RBP1.38□□□□□ -2.19
RNU4-28P-201ENST00000364739 PQLC3Q8N755 202 aa1.38□□□□□ -2.19
RNU4-28P-201ENST00000364739 RCN3Q96D15 328 aa1.38□□□□□ -2.19
RNU4-28P-201ENST00000364739 NAA50Q9GZZ1 169 aaKnown RBP1.38□□□□□ -2.19
RNU4-28P-201ENST00000364739 C20orf96Q9NUD7 363 aaPredicted RBP1.38□□□□□ -2.19
RNU4-28P-201ENST00000364739 MYEF2Q9P2K5 600 aaKnown RBP1.38□□□□□ -2.19
RNU4-28P-201ENST00000364739 AK9Q5TCS8 1911 aa1.38□□□□□ -2.19
RNU4-28P-201ENST00000364739 A0A0B4J2C4 111 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 ERLIN1O75477 346 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 CDS2O95674 445 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 IGHV3-53P01767 116 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 GSTM3P21266 225 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 TEAD1P28347 426 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 RPEL1Q2QD12 228 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 TMEM53Q6P2H8 277 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 EIF3MQ7L2H7 374 aaKnown RBP1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 TCF24Q7RTU0 167 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 LYPD6Q86Y78 171 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 ZDHHC22Q8N966 263 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 ITFG1Q8TB96 612 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 PLIN2Q99541 437 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 RDH14Q9HBH5 336 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 VAX2Q9UIW0 290 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 SAR1BQ9Y6B6 198 aa1.37□□□□□ -2.19
RNU4-28P-201ENST00000364739 SYNJ2BP-COX16A0A087WUM0 186 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 TRAV8-6A0A0B4J262 113 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 A0A0B4J2E0 115 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 MYBPHLA2RUH7 354 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 MPDU1O75352 247 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 CATP04040 527 aaKnown RBP1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 SLC6A1P30531 599 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 LGALS7P47929 136 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 KIF2BQ8N4N8 673 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 CA5BP1Q8WTZ4 195 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 MCUR1Q96AQ8 359 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 SMARCD1Q96GM5 515 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 RNF170Q96K19 258 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 PPP1R36Q96LQ0 422 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 ARV1Q9H2C2 271 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 ABCB9Q9NP78 766 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 ZNF443Q9Y2A4 671 aaPredicted RBP1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 TRAPPC1Q9Y5R8 145 aa1.36□□□□□ -2.19
RNU4-28P-201ENST00000364739 GOLGA8JA6NMD2 632 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 ZBTB5O15062 677 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 XRCC2O43543 280 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 CACNG3O60359 315 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 SNX4O95219 450 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 CDK1P06493 297 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 UBCP0CG48 685 aaKnown RBP1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 GOLGA8HP0CJ92 632 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 P0DMU3 169 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 FAM231AP0DMU4 169 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 FAM231CP0DMU5 169 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms