RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CATSPERDQ86XM0 798 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 ST8SIA1Q92185 356 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 MRPL24Q96A35 216 aaKnown RBP14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 ASB16Q96NS5 453 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 TRAPPC2LQ9UL33 140 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 A0A1W2PPC1 479 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 RNF212BA8MTL3 300 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 KLF4O43474 513 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 IAPPP10997 89 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 KITLGP21583 273 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 IL2RGP31785 369 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 SURF2Q15527 256 aaPredicted RBP14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 C17orf78Q8N4C9 275 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 ZNF439Q8NDP4 499 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 PHOSPHO2Q8TCD6 241 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 REG4Q9BYZ8 158 aa14.23□□□□□ -0.13
CLSTN1-201ENST00000361311 FRG2CA6NGY1 282 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 UPK3AO75631 287 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 RAB4AP20338 218 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 CDAP32320 146 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 GAS1P54826 345 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 ZNF574Q6ZN55 896 aaPredicted RBP14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 ATG4DQ86TL0 474 aaPredicted RBP14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 ZNF100Q8IYN0 542 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 TLCD2A6NGC4 264 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 G3V3Q6 166 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 CD81P60033 236 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 ERVK-16P61578 105 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 RPP30P78346 268 aaKnown RBP14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 SLCO1B1Q9Y6L6 691 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 TUSC2O75896 110 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 OPN1MWP04001 364 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 CST2P09228 141 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 OPN1MW2P0DN77 364 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 OPN1MW3P0DN78 364 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 PNLIPRP2P54317 469 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 TOMM20LQ6UXN7 152 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 ROBO4Q8WZ75 1007 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 MRPL38Q96DV4 380 aaKnown RBP14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 ST3GAL6Q9Y274 331 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 METTL12A8MUP2 240 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 CISD3P0C7P0 127 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 CATR1Q13166 79 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 FAM53BQ14153 422 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 CD226Q15762 336 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 ACOT6Q3I5F7 207 aaPredicted RBP14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 PP6455Q8WZ26 134 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 OR51B6Q9H340 312 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 SERGEFQ9UGK8 458 aa14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 POLR2AP24928 1970 aaKnown RBP14.22□□□□□ -0.13
CLSTN1-201ENST00000361311 ZNF816-ZNF321PA0A0X1KG74 233 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 THY1P04216 161 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 CTSDP07339 412 aaPredicted RBP14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 ZNF321PQ8N8H1 164 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 ANKRD10Q9NXR5 420 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 TCN2P20062 427 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 CSNK1EP49674 416 aaKnown RBP14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 SIRT7Q9NRC8 400 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 ZNF831Q5JPB2 1677 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 CTXN2P0C2S0 81 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 DRD1P21728 446 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 FAM3AP98173 230 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 PNRC1Q12796 327 aaPredicted RBP14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 AAED1Q7RTV5 226 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 GGACTQ9BVM4 153 aa14.21□□□□□ -0.13
CLSTN1-201ENST00000361311 IGKV1-8A0A0C4DH67 115 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 ZNF25P17030 456 aaPredicted RBP14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 MSX1P28360 303 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 TNFRSF4P43489 277 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 ZNF90Q03938 601 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 SPPL3Q8TCT6 385 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 RLN3Q8WXF3 142 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 PTX4Q96A99 478 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 REEP6Q96HR9 211 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 VSTM2LQ96N03 204 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 SLC26A1Q9H2B4 701 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 ZDHHC11Q9H8X9 412 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 PARD6AQ9NPB6 346 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 ZNF586Q9NXT0 402 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 TREM2Q9NZC2 230 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 ATG2BQ96BY7 2078 aa14.21□□□□□ -0.14
CLSTN1-201ENST00000361311 GEMIN2O14893 280 aaKnown RBP14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 GAPDHP04406 335 aaKnown RBP14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 ACAA1P09110 424 aaPredicted RBP14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 THBS4P35443 961 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 ID4P47928 161 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 TGIF1Q15583 401 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 SSX7Q7RTT5 188 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 OR10J5Q8NHC4 309 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 WBP1LQ9NX94 342 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 SPRY1O43609 319 aaPredicted RBP14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 C1QL1O75973 258 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 MMP7P09237 267 aaPredicted RBP14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 EIF1P41567 113 aaKnown RBP14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 RNF4P78317 190 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 SRYQ05066 204 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 TSPO2Q5TGU0 170 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 ADAMTS17Q8TE56 1095 aa14.2□□□□□ -0.14
CLSTN1-201ENST00000361311 MS4A10Q96PG2 267 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms