RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ZNF320A2RRD8 509 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 DUS4LO95620 317 aaKnown RBP8.71□□□□□ -1.02
CUX1-203ENST00000360264 FOXC1Q12948 553 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 NTN4Q9HB63 628 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 RGPD4Q7Z3J3 1758 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 RHOBP62745 196 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 RFLNAQ6ZTI6 216 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 ZNF561Q8N587 486 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 ANKRD53Q8N9V6 530 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 F5H697 171 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 FOXF1Q12946 379 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 OR5M11Q96RB7 305 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 A0A0A6YYD5 115 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 DHRS3O75911 302 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 SLC25A4P12235 298 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 MMP15P51511 669 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 COL9A2Q14055 689 aaPredicted RBP8.7□□□□□ -1.02
CUX1-203ENST00000360264 TMEM123Q8N131 208 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 OR4S2Q8NH73 311 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 DUS3LQ96G46 650 aaKnown RBP8.7□□□□□ -1.02
CUX1-203ENST00000360264 GPR78Q96P69 363 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 SMIM14Q96QK8 99 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 K7ESF4 209 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 LANCL1O43813 399 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 OR8B4Q96RC9 309 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 RNF2Q99496 336 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 C6orf106Q9H6K1 298 aaPredicted RBP8.7□□□□□ -1.02
CUX1-203ENST00000360264 LPAR3Q9UBY5 353 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 TRIM77I1YAP6 450 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 UPK1AO00322 258 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 CEACAM3P40198 252 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 AMIGO3Q86WK7 504 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 TMEM229BQ8NBD8 167 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 BCL7CQ8WUZ0 217 aaPredicted RBP8.7□□□□□ -1.02
CUX1-203ENST00000360264 MAP6Q96JE9 813 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 MED29Q9NX70 200 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 ICAM5Q9UMF0 924 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 MTCH2Q9Y6C9 303 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 A0A0A6YYJ9 748 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 OR2J3O76001 311 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 CDC20Q12834 499 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 OR13G1Q8NGZ3 307 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 PDFQ9HBH1 243 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.7□□□□□ -1.02
CUX1-203ENST00000360264 M0R1X1 148 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 BCL2L11O43521 198 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 GPR87Q9BY21 358 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 EPXP11678 715 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 GABRB1P18505 474 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 PRDX4Q13162 271 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 OR4C16Q8NGL9 310 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 SMIM4Q8WVI0 70 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 VPS25Q9BRG1 176 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 SDCBPO00560 298 aaPredicted RBP8.7□□□□□ -1.02
CUX1-203ENST00000360264 CIDEAO60543 219 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 DHRS7BQ6IAN0 325 aaPredicted RBP8.7□□□□□ -1.02
CUX1-203ENST00000360264 PAQR9Q6ZVX9 377 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 TRILQ7L0X0 811 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 PPP1R1CQ8WVI7 109 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 DOK1Q99704 481 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 CYB5R1Q9UHQ9 305 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 TCAPO15273 167 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 ICMTO60725 284 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 RPS19P39019 145 aaKnown RBP8.7□□□□□ -1.02
CUX1-203ENST00000360264 ID1P41134 155 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 HNRNPA3P51991 378 aaKnown RBP8.7□□□□□ -1.02
CUX1-203ENST00000360264 PAX5Q02548 391 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 HLXQ14774 488 aaPredicted RBP8.7□□□□□ -1.02
CUX1-203ENST00000360264 ZNF750Q32MQ0 723 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 RAB1CQ92928 201 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 NTNG2Q96CW9 530 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 RFPL4AA6NLU0 287 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 RFPL4AL1F8VTS6 287 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 OR4E1P0C645 316 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 CRISP2P16562 243 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 BRS3P32247 399 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 NOXO1Q8NFA2 376 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 BSGP35613 385 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 TCTN3Q6NUS6 607 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 OR5AP2Q8NGF4 316 aa8.7□□□□□ -1.02
CUX1-203ENST00000360264 CD3EP07766 207 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 ARNTP27540 789 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 ZNF574Q6ZN55 896 aaPredicted RBP8.69□□□□□ -1.02
CUX1-203ENST00000360264 SPTY2D1-AS1A0A0U1RR47 76 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 P2RX3P56373 397 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 RPL30P62888 115 aaKnown RBP8.69□□□□□ -1.02
CUX1-203ENST00000360264 C20orf24Q9BUV8 137 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 hADV38S2A0JD32 116 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 SLC6A12P48065 614 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 MOGAT2Q3SYC2 334 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 SLC2A9Q9NRM0 540 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 A0A0B4J2E0 115 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 A0A1B0GX12 115 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 KLK8O60259 260 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 FCGR3BO75015 233 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 OPRM1P35372 400 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 FFAR4Q5NUL3 377 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 ZDHHC22Q8N966 263 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 PLXNB2O15031 1838 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 MYOGP15173 224 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms