RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 Q96M66 194 aa15.89■□□□□ 0.13
PDLIM7-203ENST00000359895 DEFB127Q9H1M4 99 aa15.89■□□□□ 0.13
PDLIM7-203ENST00000359895 CLEC4MQ9H2X3 399 aaPredicted RBP15.89■□□□□ 0.13
PDLIM7-203ENST00000359895 ZDHHC11Q9H8X9 412 aa15.89■□□□□ 0.13
PDLIM7-203ENST00000359895 RTTNQ86VV8 2226 aa15.89■□□□□ 0.13
PDLIM7-203ENST00000359895 ZNF407Q9C0G0 2248 aa15.89■□□□□ 0.13
PDLIM7-203ENST00000359895 DNAJC13O75165 2243 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 FAM230AA0A1W2PPH8 454 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 PLSCR5A0PG75 271 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 PMP2P02689 132 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 ZNF35P13682 527 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 EDN3P14138 238 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 TNFSF10P50591 281 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 TAS2R46P59540 309 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 MICBQ29980 383 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 LPCAT3Q6P1A2 487 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 LYG2Q86SG7 212 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 RTN4RL2Q86UN3 420 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 TMEM17Q86X19 198 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 OR5H2Q8NGV7 314 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 SCGB3A2Q96PL1 93 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 PCDHB16Q9NRJ7 776 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 ZNF175Q9Y473 711 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 CEP250Q9BV73 2442 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 FREM1Q5H8C1 2179 aa15.88■□□□□ 0.13
PDLIM7-203ENST00000359895 HMSDA8MTL9 139 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 IL2RAP01589 272 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 AMY2BP19961 511 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 CD34P28906 385 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 HTR2BP41595 481 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 H2BFSP57053 126 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 DHRS2Q13268 280 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 C3AR1Q16581 482 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 C2orf68Q2NKX9 166 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 TEX261Q6UWH6 196 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 VASH2Q86V25 355 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 PXT1Q8NFP0 134 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 TERB2Q8NHR7 220 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 FBXW5Q969U6 566 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 IL36GQ9NZH8 169 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 U3KQ87 197 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 HTR3BO95264 441 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 HLA-AP01891 365 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 NFYAP23511 347 aaPredicted RBP15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 ZBTB25P24278 435 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 GMFBP60983 142 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 UBE2MP61081 183 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 PLP2Q04941 152 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 C9orf135Q5VTT2 229 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 MOB3CQ70IA8 216 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 NUFIP2Q7Z417 695 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 MRGPRFQ96AM1 343 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 MRPS24Q96EL2 167 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 HEXA-AS1Q9H8Q6 139 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 SPRR3Q9UBC9 169 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 HSF4Q9ULV5 492 aa15.87■□□□□ 0.13
PDLIM7-203ENST00000359895 LOC100509620A0A075B734 347 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 A0A096LPE4 126 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 A0A1W2PPZ6 126 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 SLC22A20A6NK97 555 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 OR2AT4A6NND4 320 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 CEACAM18A8MTB9 384 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 NKX2-8O15522 239 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 SIX6O95475 246 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 SERPINA5P05154 406 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 OR3A3P47888 321 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 OR3A2P47893 321 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 MALLQ13021 153 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 PLCXD3Q63HM9 321 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 LIN54Q6MZP7 749 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 PIGCQ92535 297 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 APOBEC3DQ96AK3 386 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 POM121Q96HA1 1249 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 OPA3Q9H6K4 179 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 PLEKHJ1Q9NW61 149 aa15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 NOP16Q9Y3C1 178 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-203ENST00000359895 IGKV1-27A0A075B6S5 117 aa15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 L7N2F9 121 aa15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 M0R233 179 aa15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 IFNA7P01567 189 aa15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 HLA-HP01893 362 aa15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 CD79AP11912 226 aa15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 SRSF4Q08170 494 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 CAMK2BQ13554 666 aa15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 RNFT1Q5M7Z0 435 aa15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 IGFL2Q6UWQ7 119 aa15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 CSNK2A3Q8NEV1 391 aa15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 TNRC6AQ8NDV7 1962 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-203ENST00000359895 C9orf170A2RU37 121 aa15.84■□□□□ 0.13
PDLIM7-203ENST00000359895 HLA-GP17693 338 aa15.84■□□□□ 0.13
PDLIM7-203ENST00000359895 GABRR1P24046 479 aa15.84■□□□□ 0.13
PDLIM7-203ENST00000359895 MPGP29372 298 aa15.84■□□□□ 0.13
PDLIM7-203ENST00000359895 AGTR1P30556 359 aa15.84■□□□□ 0.13
PDLIM7-203ENST00000359895 SSTR2P30874 369 aa15.84■□□□□ 0.13
PDLIM7-203ENST00000359895 CCL11P51671 97 aa15.84■□□□□ 0.13
PDLIM7-203ENST00000359895 FOXG1P55316 489 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-203ENST00000359895 SNU13P55769 128 aaKnown RBP15.84■□□□□ 0.13
PDLIM7-203ENST00000359895 SEC61A1P61619 476 aaKnown RBP15.84■□□□□ 0.13
PDLIM7-203ENST00000359895 RAB1AP62820 205 aa15.84■□□□□ 0.13
PDLIM7-203ENST00000359895 DCAF12L2Q5VW00 463 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms