RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 MNDAP41218 407 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 DEFA1P59665 94 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 DEFA3P59666 94 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 FAM189A2Q15884 450 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 TMEM69Q5SWH9 247 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 GLIPR1L1Q6UWM5 242 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 SNX29P2Q8IUI4 249 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 LYSMD2Q8IV50 215 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 Q8N402 240 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 DTX3Q8N9I9 347 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 TNFAIP8L1Q8WVP5 186 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 RFT1Q96AA3 541 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 CMBLQ96DG6 245 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 ATG5Q9H1Y0 275 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 KCNJ16Q9NPI9 418 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 MPC1Q9Y5U8 109 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 SPG11Q96JI7 2443 aa11.88□□□□□ -0.51
PDLIM5-203ENST00000359265 PRR14LQ5THK1 2151 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 A0A0A6YYH2 397 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 METTL21EPA6NDL7 271 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 A6NJ64 397 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 IQCF6A8MYZ5 107 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 CTDSPLO15194 276 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 CTAG2O75638 210 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 SCGNO76038 276 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 CSF3P09919 207 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 IL7P13232 177 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 CDK2P24941 298 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 PTGFRP43088 359 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 ALDH3B1P43353 468 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 INPP1P49441 399 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 EFNB2P52799 333 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 ERVS71-1P61550 626 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 IFITM3Q01628 133 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 PLA2G7Q13093 441 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 RGS21Q2M5E4 152 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 ZNF718Q3SXZ3 478 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 DMRTC1Q5HYR2 192 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 STEAP3Q658P3 488 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 OR2T2Q6IF00 324 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 RNF144BQ7Z419 303 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 IZUMO1Q8IYV9 350 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 ZNF808Q8N4W9 903 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 BHLHE23Q8NDY6 225 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 OR5D18Q8NGL1 313 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 KCNG3Q8TAE7 436 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 RNASE6Q93091 150 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 FAM46BQ96A09 425 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 MARS2Q96GW9 593 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 HIST1H2AAQ96QV6 131 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 CST11Q9H112 138 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 C14orf119Q9NWQ9 140 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 MRPL15Q9P015 296 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 MRPS7Q9Y2R9 242 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 NOP16Q9Y3C1 178 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 ABCA2Q9BZC7 2435 aa11.87□□□□□ -0.51
PDLIM5-203ENST00000359265 DIDO1Q9BTC0 2240 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 OR5B21A6NL26 309 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 TMEM14DPA8MWL7 114 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 XRCC3O43542 346 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 TMEM225BP0DP42 221 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 VSIG8P0DPA2 414 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 NAT2P11245 290 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 GCH1P30793 250 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 MMP15P51511 669 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 TAS2R20P59543 309 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 ZP1P60852 638 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 RPS23P62266 143 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 MRPS10P82664 201 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 QRFPP83859 136 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 SCN1BQ07699 218 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 SNTB2Q13425 540 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 BAK1Q16611 211 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 CEACAM21Q3KPI0 293 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 RAB12Q6IQ22 244 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 RGS7BPQ6MZT1 257 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 CRIP3Q6Q6R5 217 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 SEZ6L2Q6UXD5 910 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 WFDC8Q8IUA0 241 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 KLF14Q8TD94 323 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 TMEM59Q9BXS4 323 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 NGBQ9NPG2 151 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 ING4Q9UNL4 249 aa11.86□□□□□ -0.51
PDLIM5-203ENST00000359265 IGKV1-27A0A075B6S5 117 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 A0A1W2PQ09 198 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 PQLC2LA1A4F0 135 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 KDM4BO94953 1096 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 MPIG6BO95866 241 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 KITLGP21583 273 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 PTAFRP25105 342 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 CD40P25942 277 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 MPV17P39210 176 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 SORDQ00796 357 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 UNC119Q13432 240 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 GPR176Q14439 515 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 SLC22A6Q4U2R8 563 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 HACD4Q5VWC8 232 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 MBNL2Q5VZF2 373 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 OR10K2Q6IF99 312 aa11.85□□□□□ -0.51
PDLIM5-203ENST00000359265 TMEM108Q6UXF1 575 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms