RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GJC3Q8NFK1 279 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 OR9K2Q8NGE7 335 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 SNIP1Q8TAD8 396 aaKnown RBP15.54■□□□□ 0.08
RTN4-204ENST00000357732 CPNE2Q96FN4 548 aaPredicted RBP15.54■□□□□ 0.08
RTN4-204ENST00000357732 PRR13Q9NZ81 148 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 STARD10Q9Y365 291 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 SEC16AO15027 2179 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 TRBV11-1A0A0K0K1C0 115 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 SEC11BP0C7V7 166 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 PMELP40967 661 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 SUCLG1P53597 346 aaKnown RBP15.54■□□□□ 0.08
RTN4-204ENST00000357732 DHRS11Q6UWP2 260 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 Q6ZRG5 221 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 SEMA6DQ8NFY4 1073 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 THAP3Q8WTV1 239 aaPredicted RBP15.54■□□□□ 0.08
RTN4-204ENST00000357732 SLC7A5P2Q9GIP4 190 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 METTL7AQ9H8H3 244 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 FBXL17Q9UF56 701 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 CACFD1Q9UGQ2 172 aa15.54■□□□□ 0.08
RTN4-204ENST00000357732 ADAMTS20P59510 1910 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 FER1L5A0AVI2 2057 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 DHRS7CA6NNS2 312 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 STMND1H3BQB6 276 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 KNG1P01042 644 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 PTAFRP25105 342 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 NFYBP25208 207 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 CD80P33681 288 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 SLC35A1P78382 337 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 C10orf128Q5T292 105 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 FOXL2NBQ6ZUU3 175 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 OR2M3Q8NG83 312 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 SLC22A8Q8TCC7 542 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 CMSS1Q9BQ75 279 aaKnown RBP15.53■□□□□ 0.08
RTN4-204ENST00000357732 SHISA8B8ZZ34 492 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 E5RGE8 158 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 ZFAND5O76080 213 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 MSR1P21757 451 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 RAB5CP51148 216 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 ACY1Q03154 408 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 SPEM2Q0P670 501 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 USB1Q9BQ65 265 aaKnown RBP15.53■□□□□ 0.08
RTN4-204ENST00000357732 NELFAQ9H3P2 528 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 ZNF160Q9HCG1 818 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 HSF4Q9ULV5 492 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 KCNIP3Q9Y2W7 256 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 AMDHD2Q9Y303 409 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 NSG2Q9Y328 171 aa15.53■□□□□ 0.08
RTN4-204ENST00000357732 SMIM6P0DI80 62 aa15.52■□□□□ 0.08
RTN4-204ENST00000357732 RCC1P18754 421 aaPredicted RBP15.52■□□□□ 0.08
RTN4-204ENST00000357732 OTX1P32242 354 aaPredicted RBP15.52■□□□□ 0.08
RTN4-204ENST00000357732 TMEM33P57088 247 aa15.52■□□□□ 0.08
RTN4-204ENST00000357732 GPR157Q5UAW9 335 aa15.52■□□□□ 0.08
RTN4-204ENST00000357732 LRTM2Q8N967 370 aa15.52■□□□□ 0.08
RTN4-204ENST00000357732 GALNT14Q96FL9 552 aa15.52■□□□□ 0.08
RTN4-204ENST00000357732 LYZL4Q96KX0 146 aa15.52■□□□□ 0.08
RTN4-204ENST00000357732 ZNF2Q9BSG1 426 aaPredicted RBP15.52■□□□□ 0.08
RTN4-204ENST00000357732 BORCS7-ASMTA0A0B4J1R7 106 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 C1orf196B1AJZ1 125 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 MT-ND4LP03901 98 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 CYC1P08574 325 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 SERPINA2P20848 420 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 DTYMKP23919 212 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 KCNJ3P48549 501 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 HIST1H3AP68431 136 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 HIST2H3PS2Q5TEC6 136 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 CARD17Q5XLA6 110 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 HIST2H3AQ71DI3 136 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 C1QL2Q7Z5L3 287 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 SLC38A9Q8NBW4 561 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 LILRB1Q8NHL6 650 aaPredicted RBP15.51■□□□□ 0.07
RTN4-204ENST00000357732 ZNF701Q9NV72 531 aaPredicted RBP15.51■□□□□ 0.07
RTN4-204ENST00000357732 MYOTQ9UBF9 498 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 ANXA10Q9UJ72 324 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 PADI1Q9ULC6 663 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 NKAIN1Q4KMZ8 207 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 GGNBP1Q5YKI7 109 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 OR2A2Q6IF42 318 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 FADS6Q8N9I5 356 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 SPSB1Q96BD6 273 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 Q96M66 194 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 TAAR9Q96RI9 348 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 WDR77Q9BQA1 342 aaPredicted RBP15.51■□□□□ 0.07
RTN4-204ENST00000357732 PLEKHJ1Q9NW61 149 aa15.51■□□□□ 0.07
RTN4-204ENST00000357732 TSPAN15O95858 294 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 FCGR2AP12318 317 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 UBE2V2Q15819 145 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 PLXDC2Q6UX71 529 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 ZNF561Q8N587 486 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 TCEAL7Q9BRU2 100 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 SUCNR1Q9BXA5 334 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 LUZP4Q9P127 313 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 CA14Q9ULX7 337 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 STRAPQ9Y3F4 350 aaKnown RBP15.5■□□□□ 0.07
RTN4-204ENST00000357732 A0A087WZY1 265 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 ONECUT2O95948 504 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 DANCRP0C864 163 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 SNCAP37840 140 aa15.5■□□□□ 0.07
RTN4-204ENST00000357732 HABP2Q14520 560 aaPredicted RBP15.5■□□□□ 0.07
RTN4-204ENST00000357732 RPUSD3Q6P087 351 aaKnown RBP15.5■□□□□ 0.07
RTN4-204ENST00000357732 NECAP2Q9NVZ3 263 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms