RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 NUDT19A8MXV4 375 aa11.8□□□□□ -0.52
SCN8A-202ENST00000355133 FCGR3BO75015 233 aa11.8□□□□□ -0.52
SCN8A-202ENST00000355133 SPINK2P20155 84 aa11.8□□□□□ -0.52
SCN8A-202ENST00000355133 TMEM267Q0VDI3 215 aaPredicted RBP11.8□□□□□ -0.52
SCN8A-202ENST00000355133 B3GNTL1Q67FW5 361 aaPredicted RBP11.8□□□□□ -0.52
SCN8A-202ENST00000355133 HGDQ93099 445 aa11.8□□□□□ -0.52
SCN8A-202ENST00000355133 FAM60AQ9NP50 221 aa11.8□□□□□ -0.52
SCN8A-202ENST00000355133 TAAR3PQ9P1P4 343 aa11.8□□□□□ -0.52
SCN8A-202ENST00000355133 ADRB1P08588 477 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 ZNF17P17021 662 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 PRSS12P56730 875 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 LRRC29Q8WV35 223 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 FAAP24Q9BTP7 215 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 SRRQ9GZT4 340 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 C3orf80F5H4A9 247 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 G3V3Q6 166 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 MMP15P51511 669 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 SOX8P57073 446 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 TNFAIP6P98066 277 aaPredicted RBP11.79□□□□□ -0.52
SCN8A-202ENST00000355133 CDK5Q00535 292 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 FABP9Q0Z7S8 132 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 LIMS2Q7Z4I7 341 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 OR13G1Q8NGZ3 307 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 CDX2Q99626 313 aaPredicted RBP11.79□□□□□ -0.52
SCN8A-202ENST00000355133 ERRFI1Q9UJM3 462 aaPredicted RBP11.79□□□□□ -0.52
SCN8A-202ENST00000355133 GOLT1BQ9Y3E0 138 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 LAMB1P07942 1786 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 DHRS3O75911 302 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 H3F3AP84243 136 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 ZNF547Q8IVP9 402 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 CMTM3Q96MX0 182 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 ARL2-SNX15V9GYD0 113 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 LAMA4Q16363 1823 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 K7EQS6 105 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 MPZL1O95297 269 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 TMEM128Q5BJH2 165 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 M1APQ8TC57 530 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 EID2BQ96D98 161 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 SLC26A1Q9H2B4 701 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 LHX9Q9NQ69 397 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 TMEFF2Q9UIK5 374 aaPredicted RBP11.79□□□□□ -0.52
SCN8A-202ENST00000355133 GLI3P10071 1580 aa11.79□□□□□ -0.52
SCN8A-202ENST00000355133 SERTM1A2A2V5 107 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 RFPL4AA6NLU0 287 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 RFPL4AL1F8VTS6 287 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 IGHV3-13P01766 116 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 IGHV3-7P01780 117 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 SPNP16150 400 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 OR2B8PP59922 312 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 SSBP1Q04837 148 aaKnown RBP11.78□□□□□ -0.52
SCN8A-202ENST00000355133 VN1R4Q7Z5H5 301 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 TM4SF19Q96DZ7 209 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
SCN8A-202ENST00000355133 ATP6V1G2-DDX39BF2Z307 99 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 TMIGD3P0DMS9 266 aaPredicted RBP11.78□□□□□ -0.52
SCN8A-202ENST00000355133 ICAM5Q9UMF0 924 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 TNFSF14O43557 240 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 CNN1P51911 297 aaKnown RBP11.78□□□□□ -0.52
SCN8A-202ENST00000355133 PPP1CBP62140 327 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 KIAA0040Q15053 153 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 C3AR1Q16581 482 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 FOXB2Q5VYV0 432 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 CBLN3Q6UW01 205 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 TMEM108Q6UXF1 575 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 GABRG3Q99928 467 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 LIMS3P0CW19 117 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 LIMS4P0CW20 117 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 MPGP29372 298 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 CDKN2AP42771 156 aaKnown RBP11.78□□□□□ -0.52
SCN8A-202ENST00000355133 PTGFRP43088 359 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 OR3A4PP47883 348 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 NCR3LG1Q68D85 454 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 C6orf201Q7Z4U5 140 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 MSRB3Q8IXL7 192 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 A0A1W2PRD5 423 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 A0A1W2PRF3 423 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 A0A1W2PRM7 423 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 HOXC4P09017 264 aaPredicted RBP11.78□□□□□ -0.52
SCN8A-202ENST00000355133 OPRK1P41145 380 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 Q3ZCU0 254 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 SPINK9Q5DT21 86 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 CABLES2Q9BTV7 478 aa11.78□□□□□ -0.52
SCN8A-202ENST00000355133 GAR1Q9NY12 217 aaKnown RBP11.78□□□□□ -0.52
SCN8A-202ENST00000355133 MYO7AQ13402 2215 aa11.77□□□□□ -0.52
SCN8A-202ENST00000355133 M0R296 226 aa11.77□□□□□ -0.52
SCN8A-202ENST00000355133 PLPP3O14495 311 aa11.77□□□□□ -0.52
SCN8A-202ENST00000355133 SMIM17P0DL12 118 aa11.77□□□□□ -0.52
SCN8A-202ENST00000355133 SDHBP21912 280 aa11.77□□□□□ -0.52
SCN8A-202ENST00000355133 S100A4P26447 101 aaKnown RBP11.77□□□□□ -0.52
SCN8A-202ENST00000355133 KLF3P57682 345 aaPredicted RBP11.77□□□□□ -0.52
SCN8A-202ENST00000355133 ZNF683Q8IZ20 524 aa11.77□□□□□ -0.52
SCN8A-202ENST00000355133 SIGLECL1Q8N7X8 197 aa11.77□□□□□ -0.52
SCN8A-202ENST00000355133 LPAR6P43657 344 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 LRRTM1Q86UE6 522 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 ZNF320A2RRD8 509 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 SRD5A2P31213 254 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 LYPD8Q6UX82 237 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 TMEM56Q96MV1 263 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 AKIP1Q9NQ31 210 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 CACFD1Q9UGQ2 172 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms