RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TMEM100Q9NV29 134 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 RPH3ALQ9UNE2 315 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 VDAC3Q9Y277 283 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 ETV7Q9Y603 341 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 TMED7-TICAM2A0A0A6YYA0 188 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 A0A1B0GTI1 187 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 PRSS37A4D1T9 235 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 A8MWP6 167 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 NUDT19A8MXV4 375 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 C10orf142B7Z368 130 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 H0YL77 283 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 M0R143 59 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 CD5P06127 495 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 FCGR3AP08637 254 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 CCR5P51681 352 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 DMWDQ09019 674 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 SLC18B1Q6NT16 456 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 HEPN1Q6WQI6 88 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 ADAMTS17Q8TE56 1095 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 FRZBQ92765 325 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 OR8B4Q96RC9 309 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 ABHD6Q9BV23 337 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 RAB22AQ9UL26 194 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 H3BML4 177 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 DDAH2O95865 285 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 SCGB1D1O95968 90 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 BGLAPP02818 100 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 CHATP28329 748 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 GABRA4P48169 554 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 OR5I1Q13606 314 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 ARSJQ5FYB0 599 aaPredicted RBP8.3□□□□□ -1.08
SMG6-202ENST00000354901 ANKRD16Q6P6B7 361 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 DEGS2Q6QHC5 323 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 MRPL41Q8IXM3 137 aaKnown RBP8.3□□□□□ -1.08
SMG6-202ENST00000354901 RPS4Y2Q8TD47 263 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 ZNF721Q8TF20 911 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 C15orf40Q8WUR7 153 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 TAAR9Q96RI9 348 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 SLC25A21Q9BQT8 299 aaPredicted RBP8.3□□□□□ -1.08
SMG6-202ENST00000354901 NUDT22Q9BRQ3 303 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 RNF126Q9BV68 326 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 EMC6Q9BV81 110 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 MED29Q9NX70 200 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 TRAV36DV7A0A075B6V5 113 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 LOC102724200A0A096LPH7 203 aaPredicted RBP8.3□□□□□ -1.08
SMG6-202ENST00000354901 TRBV5-7A0A0A0MS05 114 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 LOC101059948A0A1B0GTJ6 334 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 TLCD2A6NGC4 264 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 SLC33A1O00400 549 aaPredicted RBP8.3□□□□□ -1.08
SMG6-202ENST00000354901 DLEU1O43261 78 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 DIRAS3O95661 229 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 CD37P11049 281 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 SRFP11831 508 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 PGCP20142 388 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 DNASE1L1P49184 302 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 RPL27P61353 136 aaKnown RBP8.3□□□□□ -1.08
SMG6-202ENST00000354901 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.3□□□□□ -1.08
SMG6-202ENST00000354901 ASPHD2Q6ICH7 369 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 BTNL3Q6UXE8 466 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 PAQR4Q8N4S7 273 aaPredicted RBP8.3□□□□□ -1.08
SMG6-202ENST00000354901 OR9K2Q8NGE7 335 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 ADIPOR1Q96A54 375 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 VPS25Q9BRG1 176 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 C19orf12Q9NSK7 152 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 COPS7AQ9UBW8 275 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 LRP12Q9Y561 859 aa8.3□□□□□ -1.08
SMG6-202ENST00000354901 ZNF705FA8MVS1 300 aaPredicted RBP8.29□□□□□ -1.08
SMG6-202ENST00000354901 ZNF705DP0CH99 300 aaPredicted RBP8.29□□□□□ -1.08
SMG6-202ENST00000354901 ZNF705BP0CI00 300 aaPredicted RBP8.29□□□□□ -1.08
SMG6-202ENST00000354901 CD38P28907 300 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 HRH1P35367 487 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 TLE1Q04724 770 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 EGR3Q06889 387 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 MOGAT2Q3SYC2 334 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 C1orf140Q5VVS0 124 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 TMEM225Q6GV28 225 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 GKN2Q86XP6 184 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 OR13C3Q8NGS6 347 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 ADAMTS18Q8TE60 1221 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 HIST1H2BLQ99880 126 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 ADAM19Q9H013 955 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 DUSP15Q9H1R2 295 aaPredicted RBP8.29□□□□□ -1.08
SMG6-202ENST00000354901 ASCL3Q9NQ33 180 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 CKLFQ9UBR5 152 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 MRPS18BQ9Y676 258 aaKnown RBP8.29□□□□□ -1.08
SMG6-202ENST00000354901 FRG2CA6NGY1 282 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 SHISA7A6NL88 538 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 PTBP3O95758 552 aaKnown RBP8.29□□□□□ -1.08
SMG6-202ENST00000354901 KNG1P01042 644 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 IFI6P09912 130 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 GLI4P10075 376 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 FOLR1P15328 257 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 PPP1CCP36873 323 aaKnown RBP8.29□□□□□ -1.08
SMG6-202ENST00000354901 FASLGP48023 281 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 ERVFRD-1P60508 538 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 LBHQ53QV2 105 aaPredicted RBP8.29□□□□□ -1.08
SMG6-202ENST00000354901 TRAPPC6BQ86SZ2 158 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 NECAP1Q8NC96 275 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 OR1L3Q8NH93 324 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 MCHR2Q969V1 340 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms