RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 RASL12Q9NYN1 266 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 C13orf42A0A1B0GVH6 325 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 CHRFAM7AQ494W8 412 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 WIPI1Q5MNZ9 446 aaPredicted RBP19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 RAB11FIP2Q7L804 512 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 OVCH2Q7RTZ1 564 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 OR13G1Q8NGZ3 307 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 TMEM230Q96A57 120 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 DDA1Q9BW61 102 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 LCATP04180 440 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 FGF2P09038 288 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 TMEM225BP0DP42 221 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 ZNF32P17041 273 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 STARP49675 285 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 AADACL3Q5VUY0 350 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 CLEC18BQ6UXF7 455 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 EMG1Q92979 244 aaKnown RBP19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 FOXB1Q99853 325 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 RTBDNQ9BSG5 229 aaPredicted RBP19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 GPR173Q9NS66 373 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 PLEKHJ1Q9NW61 149 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 EHFQ9NZC4 300 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 CYTIPO60759 359 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 GDF1P27539 372 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 NUP62P37198 522 aaPredicted RBP19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 PLXDC2Q6UX71 529 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 PXT1Q8NFP0 134 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 Q96M66 194 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 DNTTIP1Q9H147 329 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 BOKQ9UMX3 212 aaPredicted RBP19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 EDARQ9UNE0 448 aa19.42■□□□□ 0.7
NKX2-1-201ENST00000354822 TRBV6-7A0A0A0MS04 114 aa19.41■□□□□ 0.7
NKX2-1-201ENST00000354822 CSTBP04080 98 aaKnown RBP19.41■□□□□ 0.7
NKX2-1-201ENST00000354822 ACKR3P25106 362 aa19.41■□□□□ 0.7
NKX2-1-201ENST00000354822 PLEKHN1Q494U1 663 aaPredicted RBP19.41■□□□□ 0.7
NKX2-1-201ENST00000354822 ZNF471Q9BX82 626 aaPredicted RBP19.41■□□□□ 0.7
NKX2-1-201ENST00000354822 DEPPQ9NTK1 212 aa19.41■□□□□ 0.7
NKX2-1-201ENST00000354822 MBD2Q9UBB5 411 aa19.41■□□□□ 0.7
NKX2-1-201ENST00000354822 LNP1A1A4G5 178 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 FIGNL2A6NMB9 653 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 SERPINA5P05154 406 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 LUMP51884 338 aaPredicted RBP19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 ATXN7L3Q14CW9 347 aaPredicted RBP19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 LHFPL2Q6ZUX7 228 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 BVESQ8NE79 360 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 ARPC5LQ9BPX5 153 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 HSF4Q9ULV5 492 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 RRP8O43159 456 aaKnown RBP19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 JMJD7P0C870 316 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 B4GALT1P15291 398 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 HTR5AP47898 357 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 RBP2P50120 134 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 GFRA1P56159 465 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 PSG4Q00888 419 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 RSU1Q15404 277 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 CEACAM16Q2WEN9 425 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 ZNF100Q8IYN0 542 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 OR2AE1Q8NHA4 323 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 PSMF1Q92530 271 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 ALKBH3Q96Q83 286 aaPredicted RBP19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 SPRY4Q9C004 299 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 WDR13Q9H1Z4 485 aa19.4■□□□□ 0.7
NKX2-1-201ENST00000354822 SDCBPO00560 298 aaPredicted RBP19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 NRN1LQ496H8 165 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 ASCL4Q6XD76 172 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 MOB3CQ70IA8 216 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 TMEM45BQ96B21 275 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 DMRTA2Q96SC8 542 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 OR2H1Q9GZK4 316 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 GPR35Q9HC97 309 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 GABRR1P24046 479 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 CLDN15P56746 228 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 CCDC157Q569K6 752 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 PLA2G2CQ5R387 149 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 TMEM42Q69YG0 159 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 BORCS8Q96FH0 119 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 LINC00052Q96N35 136 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 ZNF701Q9NV72 531 aaPredicted RBP19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 LRFN1Q9P244 771 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 C14orf166Q9Y224 244 aaKnown RBP19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 CSAG2Q9Y5P2 127 aa19.39■□□□□ 0.69
NKX2-1-201ENST00000354822 F5H0A9 414 aaPredicted RBP19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 SCO1O75880 301 aa19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 HTR3BO95264 441 aa19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 FARS2O95363 451 aaKnown RBP19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 SUPT4H1P63272 117 aaKnown RBP19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 FOXO1Q12778 655 aa19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 SLC9A3R2Q15599 337 aa19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 PAN3Q58A45 887 aaKnown RBP19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 BEX5Q5H9J7 111 aa19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 C6orf201Q7Z4U5 140 aa19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 AKR7LQ8NHP1 331 aa19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 THOC3Q96J01 351 aaKnown RBP19.38■□□□□ 0.69
NKX2-1-201ENST00000354822 FAM230AA0A1W2PPH8 454 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 NRASP01111 189 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 HGFACQ04756 655 aa19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 RPUSD3Q6P087 351 aaKnown RBP19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 ZSCAN4Q8NAM6 433 aaPredicted RBP19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 RELL2Q8NC24 303 aaPredicted RBP19.37■□□□□ 0.69
NKX2-1-201ENST00000354822 GALNT11Q8NCW6 608 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms