RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 FRYQ5TBA9 3013 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 AGPAT2O15120 278 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 SCGB1D2O95969 90 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 RCC1P18754 421 aaPredicted RBP17.1■□□□□ 0.33
COL13A1-201ENST00000354547 PTGER4P35408 488 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 THBS4P35443 961 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 CBX5P45973 191 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 CLEC9AQ6UXN8 241 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 LHFPL1Q86WI0 220 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 CHST5Q9GZS9 411 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 ANAPC10Q9UM13 185 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 A0A0G2JMM0 328 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 A0A1W2PPB8 328 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 A0A1W2PRS3 328 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 TMEM218A2RU14 115 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 KIR3DP1A8MWS1 328 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 F8W036 122 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 ATG12O94817 140 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 CSTBP04080 98 aaKnown RBP17.1■□□□□ 0.33
COL13A1-201ENST00000354547 LCATP04180 440 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 NAT2P11245 290 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 COX6A1P12074 109 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 ICAM2P13598 275 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 CPT2P23786 658 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 BLOC1S1P78537 153 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 SP6Q3SY56 376 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 CCDC157Q569K6 752 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 PDSS1Q5T2R2 415 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 PRSS54Q6PEW0 395 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 RPS19BP1Q86WX3 136 aaKnown RBP17.1■□□□□ 0.33
COL13A1-201ENST00000354547 HAS2Q92819 552 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 HLA-CQ95604 372 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 SLC26A1Q9H2B4 701 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 CRLF2Q9HC73 371 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 LHX6Q9UPM6 363 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 FBXO24O75426 580 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 B4GALT1P15291 398 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 CTRB1P17538 263 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 RPS18P62269 152 aaKnown RBP17.09■□□□□ 0.33
COL13A1-201ENST00000354547 CTRB2Q6GPI1 263 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 PEG10Q86TG7 708 aaKnown RBP17.09■□□□□ 0.33
COL13A1-201ENST00000354547 MAML2Q8IZL2 1156 aaPredicted RBP17.09■□□□□ 0.33
COL13A1-201ENST00000354547 PUSL1Q8N0Z8 303 aaKnown RBP17.09■□□□□ 0.33
COL13A1-201ENST00000354547 TMEM123Q8N131 208 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 ZIC4Q8N9L1 334 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 RNF141Q8WVD5 230 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 ADCYAP1P18509 176 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 RBMXP38159 391 aaKnown RBP17.09■□□□□ 0.33
COL13A1-201ENST00000354547 ZNF84P51523 738 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 DSCR4P56555 118 aaPredicted RBP17.09■□□□□ 0.33
COL13A1-201ENST00000354547 RSU1Q15404 277 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 FAM189A2Q15884 450 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 IAH1Q2TAA2 248 aaPredicted RBP17.09■□□□□ 0.33
COL13A1-201ENST00000354547 RPL7L1Q6DKI1 246 aaKnown RBP17.09■□□□□ 0.33
COL13A1-201ENST00000354547 OR2A2Q6IF42 318 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 TMEM54Q969K7 222 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 C2orf50Q96LR7 162 aa17.09■□□□□ 0.33
COL13A1-201ENST00000354547 PARP12Q9H0J9 701 aaKnown RBP17.09■□□□□ 0.33
COL13A1-201ENST00000354547 F8VVB4 439 aa17.08■□□□□ 0.33
COL13A1-201ENST00000354547 F8VWA3 439 aa17.08■□□□□ 0.33
COL13A1-201ENST00000354547 KLF7O75840 302 aaPredicted RBP17.08■□□□□ 0.33
COL13A1-201ENST00000354547 NTF4P34130 210 aa17.08■□□□□ 0.33
COL13A1-201ENST00000354547 FXYD4P59646 89 aa17.08■□□□□ 0.33
COL13A1-201ENST00000354547 MAFAQ8NHW3 353 aaPredicted RBP17.08■□□□□ 0.33
COL13A1-201ENST00000354547 SPTSSAQ969W0 71 aa17.08■□□□□ 0.33
COL13A1-201ENST00000354547 NAA11Q9BSU3 229 aaPredicted RBP17.08■□□□□ 0.33
COL13A1-201ENST00000354547 V9GYS6 101 aa17.08■□□□□ 0.33
COL13A1-201ENST00000354547 NSG1A0A0A6YYJ2 146 aa17.08■□□□□ 0.32
COL13A1-201ENST00000354547 EIF1BO60739 113 aaKnown RBP17.08■□□□□ 0.32
COL13A1-201ENST00000354547 MTRF1O75570 445 aaKnown RBP17.08■□□□□ 0.32
COL13A1-201ENST00000354547 NR2C1P13056 603 aa17.08■□□□□ 0.32
COL13A1-201ENST00000354547 RPS2P15880 293 aaKnown RBP17.08■□□□□ 0.32
COL13A1-201ENST00000354547 HGFACQ04756 655 aa17.08■□□□□ 0.32
COL13A1-201ENST00000354547 CDCP2Q5VXM1 449 aa17.08■□□□□ 0.32
COL13A1-201ENST00000354547 CBLN2Q8IUK8 224 aa17.08■□□□□ 0.32
COL13A1-201ENST00000354547 SULF2Q8IWU5 870 aa17.08■□□□□ 0.32
COL13A1-201ENST00000354547 SLC30A7Q8NEW0 376 aa17.08■□□□□ 0.32
COL13A1-201ENST00000354547 PP6455Q8WZ26 134 aa17.08■□□□□ 0.32
COL13A1-201ENST00000354547 ARL11Q969Q4 196 aa17.08■□□□□ 0.32
COL13A1-201ENST00000354547 IMMP1LQ96LU5 166 aa17.08■□□□□ 0.32
COL13A1-201ENST00000354547 LSM5Q9Y4Y9 91 aaKnown RBP17.08■□□□□ 0.32
COL13A1-201ENST00000354547 TRBV6-7A0A0A0MS04 114 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 A0A0U1RQV5 110 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 LOC102725191A0A1B0GVB3 256 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 ZNF850A8MQ14 1090 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 C9J4A7 227 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 SGCEO43556 437 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 IGHV3-9P01782 118 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 NME2P22392 152 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 C10orf128Q5T292 105 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 OR14L1PQ8NHC6 308 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 ANGPTL4Q9BY76 406 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 CCDC187A0A096LP49 1063 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 TRAPPC6AO75865 159 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 IFNA2P01563 188 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 CTSSP25774 331 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 TSPO2Q5TGU0 170 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 STOML3Q8TAV4 291 aa17.07■□□□□ 0.32
COL13A1-201ENST00000354547 EMG1Q92979 244 aaKnown RBP17.07■□□□□ 0.32
COL13A1-201ENST00000354547 CLDN23Q96B33 292 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms