RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 MMP15P51511 669 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 PAX8Q06710 450 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 PDCD1Q15116 288 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 FAM189A2Q15884 450 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 ALG10BQ5I7T1 473 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 ERICH5Q6P6B1 374 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 TBPL2Q6SJ96 375 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 LRRN1Q6UXK5 716 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 SLC25A40Q8TBP6 338 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 TMEM19Q96HH6 336 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 PITX2Q99697 317 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 SOSTQ9BQB4 213 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 NKX6-2Q9C056 277 aaPredicted RBP9.39□□□□□ -0.91
RTN3-204ENST00000354497 MMP28Q9H239 520 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 OR51V1Q9H2C8 321 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 WDR55Q9H6Y2 383 aaPredicted RBP9.39□□□□□ -0.91
RTN3-204ENST00000354497 MAGIXQ9H6Y5 334 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 MSL2Q9HCI7 577 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 NANSQ9NR45 359 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 CYSLTR2Q9NS75 346 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 TMEM106BQ9NUM4 274 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 TMEM38BQ9NVV0 291 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 SSR3Q9UNL2 185 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 GAB2Q9UQC2 676 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 POLR3KQ9Y2Y1 108 aaPredicted RBP9.39□□□□□ -0.91
RTN3-204ENST00000354497 CHST2Q9Y4C5 530 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 ORC6Q9Y5N6 252 aa9.39□□□□□ -0.91
RTN3-204ENST00000354497 A0A1B0GWA3 101 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 C5orf52A6NGY3 159 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 LRRN3E7EW58 273 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 G3V2T6 193 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 UBDO15205 165 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 CHP2O43745 196 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 OR6A2O95222 327 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 MPC2O95563 127 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 PLATP00750 562 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 BGLAPP02818 100 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 NMBP08949 121 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 SDHAP31040 664 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 IRF3Q14653 427 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 MELKQ14680 651 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 C2orf68Q2NKX9 166 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 BEAN1Q3B7T3 259 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 TMEM95Q3KNT9 176 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 TMEM155Q4W5P6 130 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 ATPAF1Q5TC12 328 aaPredicted RBP9.38□□□□□ -0.91
RTN3-204ENST00000354497 RPL13AP3Q6NVV1 102 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 WDR88Q6ZMY6 472 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 RASSF6Q6ZTQ3 369 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 ENTHD1Q8IYW4 607 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 LRRC18Q8N456 261 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 MRAPQ8TCY5 172 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 SCARB1Q8WTV0 552 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 TMEM54Q969K7 222 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 UPRTQ96BW1 309 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 NARS2Q96I59 477 aaKnown RBP9.38□□□□□ -0.91
RTN3-204ENST00000354497 OR52E6Q96RD3 313 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 EPYCQ99645 322 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 KCNJ15Q99712 375 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 CCDC90BQ9GZT6 254 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 C14orf119Q9NWQ9 140 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 IL20RAQ9UHF4 553 aa9.38□□□□□ -0.91
RTN3-204ENST00000354497 PTGES3LE9PB15 166 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 F5H0A9 414 aaPredicted RBP9.37□□□□□ -0.91
RTN3-204ENST00000354497 TEX46H3BTG2 121 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 FXYD1O00168 92 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 PDCD5O14737 125 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 DHHO43323 396 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 TIMM8AO60220 97 aaPredicted RBP9.37□□□□□ -0.91
RTN3-204ENST00000354497 PIP5K1CO60331 668 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 FZD7O75084 574 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 SC5DO75845 299 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 CSF1P09603 554 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 SLC6A2P23975 617 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 LSM3P62310 102 aaKnown RBP9.37□□□□□ -0.91
RTN3-204ENST00000354497 GNB2P62879 340 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 LGALSLQ3ZCW2 172 aaPredicted RBP9.37□□□□□ -0.91
RTN3-204ENST00000354497 TMEM255AQ5JRV8 349 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 GPR157Q5UAW9 335 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 RUSC1-AS1Q66K80 236 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 ZNF367Q7RTV3 350 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 DPPA2Q7Z7J5 298 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 ZNF101Q8IZC7 436 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 CLDN22Q8N7P3 220 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 NANOGP1Q8N7R0 232 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 SLC38A5Q8WUX1 472 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 SLC41A3Q96GZ6 507 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 ARHGDIGQ99819 225 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 COPS4Q9BT78 406 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 SSBP3Q9BWW4 388 aaPredicted RBP9.37□□□□□ -0.91
RTN3-204ENST00000354497 OR2J1Q9GZK6 312 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 ERVK13-1Q9NX77 482 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 ZDHHC8Q9ULC8 765 aa9.37□□□□□ -0.91
RTN3-204ENST00000354497 IGHV2-70DA0A0C4DH43 119 aa9.36□□□□□ -0.91
RTN3-204ENST00000354497 C5orf49A4QMS7 147 aa9.36□□□□□ -0.91
RTN3-204ENST00000354497 CEACAM18A8MTB9 384 aa9.36□□□□□ -0.91
RTN3-204ENST00000354497 PRSS47A8MTI9 375 aa9.36□□□□□ -0.91
RTN3-204ENST00000354497 PLPP3O14495 311 aa9.36□□□□□ -0.91
RTN3-204ENST00000354497 MELTFP08582 738 aa9.36□□□□□ -0.91
RTN3-204ENST00000354497 QDPRP09417 244 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms