RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 OR4D6Q8NGJ1 314 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 OR14K1Q8NGZ2 314 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 UBASH3BQ8TF42 649 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 PP6455Q8WZ26 134 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 ITFG2Q969R8 447 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 FBXO17Q96EF6 278 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 ZNF799Q96GE5 643 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 PGAM5Q96HS1 289 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 FOXB1Q99853 325 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 DEFB127Q9H1M4 99 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 OR10A2Q9H208 303 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 EXO5Q9H790 373 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 CNTD2Q9H8S5 307 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 GPR35Q9HC97 309 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 NEK6Q9HC98 313 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 GPR84Q9NQS5 396 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 NUDT15Q9NV35 164 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 PARPBPQ9NWS1 579 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 ING3Q9NXR8 418 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 ZNF319Q9P2F9 582 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 GHRLQ9UBU3 117 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 MCTS1Q9ULC4 181 aaKnown RBP7.1□□□□□ -1.27
CD44-205ENST00000352818 LIPGQ9Y5X9 500 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 TRAV18A0A075B6X5 111 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 A0A0A6YYJ9 748 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 METTL21EPA6NDL7 271 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 DEFB108AA8MXU0 73 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 SGCEO43556 437 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 PEX14O75381 377 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 MTRF1O75570 445 aaKnown RBP7.09□□□□□ -1.27
CD44-205ENST00000352818 KDM4BO94953 1096 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 NDUFB6O95139 128 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 TGM6O95932 706 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 C1QBP02746 253 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 MELTFP08582 738 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 VSIG8P0DPA2 414 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 PSMB1P20618 241 aaKnown RBP7.09□□□□□ -1.27
CD44-205ENST00000352818 STOMP27105 288 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 NTF4P34130 210 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 MAGEA5P43359 124 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 RNPS1Q15287 305 aaKnown RBP7.09□□□□□ -1.27
CD44-205ENST00000352818 KCNJ8Q15842 424 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 GSG1Q2KHT4 349 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 RSPO1Q2MKA7 263 aaPredicted RBP7.09□□□□□ -1.27
CD44-205ENST00000352818 FAM109AQ8N4B1 249 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 TMEM229BQ8NBD8 167 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 OR52H1Q8NGJ2 320 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 OR13C9Q8NGT0 318 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 OR1F12Q8NHA8 337 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 FAM46BQ96A09 425 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 MED30Q96HR3 178 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 ZNF845Q96IR2 970 aaPredicted RBP7.09□□□□□ -1.27
CD44-205ENST00000352818 RNF170Q96K19 258 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 LYZL4Q96KX0 146 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 BEX2Q9BXY8 128 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 CHST5Q9GZS9 411 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 C20orf85Q9H1P6 137 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 ATG5Q9H1Y0 275 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 SLC6A15Q9H2J7 730 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 KCNK15Q9H427 330 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 RGCCQ9H4X1 137 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 CRLF2Q9HC73 371 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 GP6Q9HCN6 339 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 PLEK2Q9NYT0 353 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 KLK11Q9UBX7 282 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 PAIP2BQ9ULR5 123 aaKnown RBP7.09□□□□□ -1.27
CD44-205ENST00000352818 NOSIPQ9Y314 301 aaKnown RBP7.09□□□□□ -1.27
CD44-205ENST00000352818 N6AMT1Q9Y5N5 214 aa7.09□□□□□ -1.27
CD44-205ENST00000352818 A0A096LNT2 108 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 FAM166BA8MTA8 275 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 GMDSO60547 372 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 MRPL33O75394 65 aaKnown RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 FARS2O95363 451 aaKnown RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 CD74P04233 296 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 IL5P05113 134 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 YES1P07947 543 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 CHRM2P08172 466 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 CELA3AP09093 270 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 MMP7P09237 267 aaPredicted RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 AKAIN1P0CW23 69 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 COX5BP10606 129 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 SLC2A1P11166 492 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 CPN1P15169 458 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 BMP5P22003 454 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 MPZP25189 248 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 RCVRNP35243 200 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 ZNF93P35789 620 aaPredicted RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 CCR6P51684 374 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 PPIAP62937 165 aaKnown RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 GALK2Q01415 458 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 MAB21L1Q13394 359 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 UNC119Q13432 240 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 CEACAM16Q2WEN9 425 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 PCGF3Q3KNV8 242 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 ZNF260Q3ZCT1 412 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 TMEM255AQ5JRV8 349 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 C1orf185Q5T7R7 199 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 METTL11BQ5VVY1 283 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 AWAT2Q6E213 333 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 DPPA2Q7Z7J5 298 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms