RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 DHRS2Q13268 280 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 C1orf100Q5SVJ3 147 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 CLVS2Q5SYC1 327 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 ZNF774Q6NX45 483 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 DEGS2Q6QHC5 323 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 LYPD6Q86Y78 171 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 SKA3Q8IX90 412 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 ZNF283Q8N7M2 679 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 ACBD4Q8NC06 268 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 OR4S1Q8NGB4 309 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 AKR7LQ8NHP1 331 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 SARAFQ96BY9 339 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 SOX7Q9BT81 388 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 RNF122Q9H9V4 155 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 ZNF319Q9P2F9 582 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 ZNF107Q9UII5 783 aaPredicted RBP11.68□□□□□ -0.54
UBA3-201ENST00000349511 RHBDD3Q9Y3P4 386 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 A0A1B0GTI1 187 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 WIPF3A6NGB9 483 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 E9PLN8 166 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 TRIM77I1YAP6 450 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 CD8AP01732 235 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 ABOP16442 354 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 MGMTP16455 207 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 ZNF32P17041 273 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 CD34P28906 385 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 SLC6A9P48067 706 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 CX3CR1P49238 355 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 ZNF121P58317 390 aaPredicted RBP11.68□□□□□ -0.54
UBA3-201ENST00000349511 ARF1P84077 181 aaKnown RBP11.68□□□□□ -0.54
UBA3-201ENST00000349511 RIPPLY2Q5TAB7 128 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 SLC16A14Q7RTX9 510 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 OR5M8Q8NGP6 311 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 ST8SIA2Q92186 375 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 PBOV1Q9GZY1 135 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 DKK4Q9UBT3 224 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 VSIG4Q9Y279 399 aa11.68□□□□□ -0.54
UBA3-201ENST00000349511 ZGRF1Q86YA3 2104 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 ATRXP46100 2492 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 A0A0D9SG52 128 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 OR5H14A6NHG9 310 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 DISC1C4P0D8 188 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 ZNF587BE7ETH6 402 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 TTRP02766 147 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 UBBP0CG47 229 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 UBCP0CG48 685 aaKnown RBP11.67□□□□□ -0.54
UBA3-201ENST00000349511 MMP16P51512 607 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 RPS27AP62979 156 aaKnown RBP11.67□□□□□ -0.54
UBA3-201ENST00000349511 UBA52P62987 128 aaKnown RBP11.67□□□□□ -0.54
UBA3-201ENST00000349511 FGL1Q08830 312 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 NKPD1Q17RQ9 610 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 TMEM244Q5VVB8 128 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 ZNF704Q6ZNC4 412 aaPredicted RBP11.67□□□□□ -0.54
UBA3-201ENST00000349511 FAM57BQ71RH2 274 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 CD163Q86VB7 1156 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 ZNF584Q8IVC4 421 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 CISD2Q8N5K1 135 aaKnown RBP11.67□□□□□ -0.54
UBA3-201ENST00000349511 EIF4E3Q8N5X7 224 aaKnown RBP11.67□□□□□ -0.54
UBA3-201ENST00000349511 CNEP1R1Q8N9A8 125 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 C9orf106Q8NAJ2 232 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 PXT1Q8NFP0 134 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 AQP3Q92482 292 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 PTX4Q96A99 478 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 SLC25A32Q9H2D1 315 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 CLCF1Q9UBD9 225 aa11.67□□□□□ -0.54
UBA3-201ENST00000349511 NOP16Q9Y3C1 178 aaKnown RBP11.67□□□□□ -0.54
UBA3-201ENST00000349511 INTS1Q8N201 2190 aaKnown RBP11.67□□□□□ -0.54
UBA3-201ENST00000349511 CCSO14618 274 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 RAB6AP20340 208 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 SRSF4Q08170 494 aaKnown RBP11.66□□□□□ -0.54
UBA3-201ENST00000349511 RSPO1Q2MKA7 263 aaPredicted RBP11.66□□□□□ -0.54
UBA3-201ENST00000349511 ZNF260Q3ZCT1 412 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 TFAP2EQ6VUC0 442 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 FJX1Q86VR8 437 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 COMMD2Q86X83 199 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 NKAIN3Q8N8D7 197 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 OR51E1Q8TCB6 317 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 FOXRED1Q96CU9 486 aaPredicted RBP11.66□□□□□ -0.54
UBA3-201ENST00000349511 MRPS24Q96EL2 167 aaKnown RBP11.66□□□□□ -0.54
UBA3-201ENST00000349511 CNTD2Q9H8S5 307 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 C12orf4Q9NQ89 552 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 TPRP12270 2363 aaKnown RBP11.66□□□□□ -0.54
UBA3-201ENST00000349511 SPTA1P02549 2419 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 OR14I1A6ND48 311 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 SGCEO43556 437 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 HLA-AP01891 365 aaKnown RBP11.66□□□□□ -0.54
UBA3-201ENST00000349511 PSG4Q00888 419 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 FOXF2Q12947 444 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 MEF2DQ14814 521 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 CDNFQ49AH0 187 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 C11orf87Q6NUJ2 197 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 TRAPPC6BQ86SZ2 158 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 RPRMLQ8N4K4 120 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 KCNRGQ8N5I3 272 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 FGGYQ96C11 551 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 CMBLQ96DG6 245 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 SEC22AQ96IW7 307 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 PDCD10Q9BUL8 212 aa11.66□□□□□ -0.54
UBA3-201ENST00000349511 WDR13Q9H1Z4 485 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms