RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 FGF7P21781 194 aa12.54□□□□□ -0.4
RLIM-202ENST00000349225 GPR3P46089 330 aa12.54□□□□□ -0.4
RLIM-202ENST00000349225 AFF3P51826 1226 aaKnown RBP12.54□□□□□ -0.4
RLIM-202ENST00000349225 OR5AS1Q8N127 324 aa12.54□□□□□ -0.4
RLIM-202ENST00000349225 C17orf78Q8N4C9 275 aa12.54□□□□□ -0.4
RLIM-202ENST00000349225 ZFP62Q8NB50 900 aaPredicted RBP12.54□□□□□ -0.4
RLIM-202ENST00000349225 OR10G6Q8NH81 332 aa12.54□□□□□ -0.4
RLIM-202ENST00000349225 EMG1Q92979 244 aaKnown RBP12.54□□□□□ -0.4
RLIM-202ENST00000349225 ATG2BQ96BY7 2078 aa12.54□□□□□ -0.4
RLIM-202ENST00000349225 GPR89AB7ZAQ6 455 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 DVL1O14640 695 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 OR4A8P0C604 315 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 GPR89BP0CG08 455 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 RBMXP38159 391 aaKnown RBP12.53□□□□□ -0.4
RLIM-202ENST00000349225 PCP4P48539 62 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 CSNK2A1P68400 391 aaPredicted RBP12.53□□□□□ -0.4
RLIM-202ENST00000349225 ANKRD39Q53RE8 183 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 CSNK2A3Q8NEV1 391 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 OR10J5Q8NHC4 309 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 RNASEH2CQ8TDP1 164 aaKnown RBP12.53□□□□□ -0.4
RLIM-202ENST00000349225 C5orf34Q96MH7 638 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 ACTR3CQ9C0K3 210 aaPredicted RBP12.53□□□□□ -0.4
RLIM-202ENST00000349225 PQBP1O60828 265 aaKnown RBP12.53□□□□□ -0.4
RLIM-202ENST00000349225 CLPSP04118 112 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 IFI6P09912 130 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 NPSP0C0P6 89 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 ZNF25P17030 456 aaPredicted RBP12.53□□□□□ -0.4
RLIM-202ENST00000349225 RGS19P49795 217 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 NKAIN1Q4KMZ8 207 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 FAM86C1Q9NVL1 165 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 WDFY3Q8IZQ1 3526 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 MYO7BQ6PIF6 2116 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.53□□□□□ -0.4
RLIM-202ENST00000349225 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.53□□□□□ -0.4
RLIM-202ENST00000349225 E5RGE8 158 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 FTCDNL1E5RQL4 147 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 CHRM2P08172 466 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 PGA3P0DJD8 388 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 GLI4P10075 376 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 OR3A2P47893 321 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 ZNF157P51786 506 aaPredicted RBP12.53□□□□□ -0.4
RLIM-202ENST00000349225 ZFP36L1Q07352 338 aaKnown RBP12.53□□□□□ -0.4
RLIM-202ENST00000349225 SLC10A1Q14973 349 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 SGPP2Q8IWX5 399 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 SHDQ96IW2 340 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 ZFYVE21Q9BQ24 234 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 ZBP1Q9H171 429 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 MRPS28Q9Y2Q9 187 aaKnown RBP12.53□□□□□ -0.4
RLIM-202ENST00000349225 NSG2Q9Y328 171 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 HEBP2Q9Y5Z4 205 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 ATG2AQ2TAZ0 1938 aa12.53□□□□□ -0.4
RLIM-202ENST00000349225 BORCS7-ASMTA0A0B4J1R7 106 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 GPR137BO60478 399 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 SCAF4O95104 1147 aaKnown RBP12.52□□□□□ -0.4
RLIM-202ENST00000349225 IL11P20809 199 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 TM4SF4P48230 202 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 CRIP3Q6Q6R5 217 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 LYZL2Q7Z4W2 148 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 SPRED2Q7Z698 418 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 GPR137CQ8N3F9 429 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 LFNGQ8NES3 379 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 DNASE2BQ8WZ79 361 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 DAZLQ92904 295 aaKnown RBP12.52□□□□□ -0.4
RLIM-202ENST00000349225 TVP23CQ96ET8 276 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 CENPMQ9NSP4 180 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 TCFL5Q9UL49 500 aa12.52□□□□□ -0.4
RLIM-202ENST00000349225 CRYM-AS1A6NIL9 109 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 DHRS7CA6NNS2 312 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 DBHP09172 617 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 ZNF10P21506 573 aaPredicted RBP12.52□□□□□ -0.41
RLIM-202ENST00000349225 PPP1CAP62136 330 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 RAB35Q15286 201 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 C2orf27AQ580R0 203 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 TSPO2Q5TGU0 170 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 LHX8Q68G74 356 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 C1QL2Q7Z5L3 287 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 TMEM183AQ8IXX5 376 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 ELSPBP1Q96BH3 223 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 SYT3Q9BQG1 590 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 PHPT1Q9NRX4 125 aaPredicted RBP12.52□□□□□ -0.41
RLIM-202ENST00000349225 CBLN4Q9NTU7 201 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 SUSD2Q9UGT4 822 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 HSF4Q9ULV5 492 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 MBP02144 154 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 ARFRP1Q13795 201 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.52□□□□□ -0.41
RLIM-202ENST00000349225 ZNF321PQ8N8H1 164 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 OR10S1Q8NGN2 331 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 OR4X1Q8NH49 305 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 SCGB3A2Q96PL1 93 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 GPR87Q9BY21 358 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 CDH20Q9HBT6 801 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 SPACA6W5XKT8 324 aa12.52□□□□□ -0.41
RLIM-202ENST00000349225 A6NNC1 897 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 FOXI3A8MTJ6 420 aaPredicted RBP12.51□□□□□ -0.41
RLIM-202ENST00000349225 ZNF705GA8MUZ8 300 aaPredicted RBP12.51□□□□□ -0.41
RLIM-202ENST00000349225 HPNP05981 417 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 SFTPA2Q8IWL1 248 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 PRR18Q8N4B5 295 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms