RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 BSCL2Q96G97 398 aaPredicted RBP9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 JSRP1Q96MG2 331 aaPredicted RBP9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 LPAR5Q9H1C0 372 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 TXNIPQ9H3M7 391 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 KIAA1456Q9P272 454 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 SRPK3Q9UPE1 567 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 EMC9Q9Y3B6 208 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 LSM5Q9Y4Y9 91 aaKnown RBP9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 A0A087WZY1 265 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 A0A0A6YYD4 124 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 FRG2CA6NGY1 282 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 FTCDNL1E5RQL4 147 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 UTS2O95399 124 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 GCGP01275 180 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 CLPSP04118 112 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 HSPB1P04792 205 aaKnown RBP9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 QDPRP09417 244 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 OR5H8P0DN80 308 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 GABRR1P24046 479 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 ECI1P42126 302 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 RND2P52198 227 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 DCAF7P61962 342 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 CD226Q15762 336 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 PLAC9Q5JTB6 97 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 C1orf140Q5VVS0 124 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 FBXO46Q6PJ61 603 aaPredicted RBP9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 ZNF429Q86V71 674 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 C1orf87Q8N0U7 546 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 PLPP5Q8NEB5 264 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 FAM213BQ8TBF2 198 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 FAM210BQ96KR6 192 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 NICN1Q9BSH3 213 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 TMEM106CQ9BVX2 250 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 SH3BGRL3Q9H299 93 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 TMEM242Q9NWH2 141 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 FOXD3Q9UJU5 478 aaPredicted RBP9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 C14orf166Q9Y224 244 aaKnown RBP9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 URGCP-MRPS24S4R325 110 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 TMEM131Q92545 1883 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 A0A1W2PQF6 199 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 CDRT15L2A8MXV6 281 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 H0YL77 283 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 CYTIPO60759 359 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 DXOO77932 396 aaKnown RBP9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 IL18BPO95998 194 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 AMY2BP19961 511 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 CD200P41217 278 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 OR3A2P47893 321 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 CCR4P51679 360 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 GLO1Q04760 184 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 ZP2Q05996 745 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 HAGHQ16775 308 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 OTPQ5XKR4 325 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 CYB5R2Q6BCY4 276 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 SP5Q6BEB4 398 aaPredicted RBP9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 LANCL3Q6ZV70 420 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 COX15Q7KZN9 410 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 MARCH3Q86UD3 253 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 SGPP2Q8IWX5 399 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 SHISA5Q8N114 240 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 GPR137CQ8N3F9 429 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 FGGYQ96C11 551 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 POM121Q96HA1 1249 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 SHDQ96IW2 340 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 STARD5Q9NSY2 213 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 OR14J1Q9UGF5 321 aa9.1□□□□□ -0.95
CHRNA1-202ENST00000348749 NPIPB13A6NJU9 1138 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 NPIPB4C9JG80 1138 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 H0YIG0 161 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 MBPP02686 304 aaPredicted RBP9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 AMBPP02760 352 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 OR5AC1P0C628 307 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 HOXB2P14652 356 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 FOLR1P15328 257 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 PGCP20142 388 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 RND3P61587 244 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 H3F3AP84243 136 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 INSM1Q01101 510 aaPredicted RBP9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 GAGE1Q13065 139 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 FAM189A2Q15884 450 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 ZNF506Q5JVG8 444 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 TMEM240Q5SV17 173 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 ABLIM2Q6H8Q1 611 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 SPSB3Q6PJ21 355 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 DNM1P34Q6PK57 102 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 SLC37A2Q8TED4 501 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 NIPSNAP3BQ9BS92 247 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 SNHG12Q9BXW3 62 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 PLA2G2FQ9BZM2 168 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 CDH20Q9HBT6 801 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 FAM60AQ9NP50 221 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 DKKL1Q9UK85 242 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 MMACHCQ9Y4U1 282 aa9.09□□□□□ -0.95
CHRNA1-202ENST00000348749 DOCK8Q8NF50 2099 aa9.08□□□□□ -0.96
CHRNA1-202ENST00000348749 A6NIZ1 184 aa9.08□□□□□ -0.96
CHRNA1-202ENST00000348749 H0Y8X5 98 aa9.08□□□□□ -0.96
CHRNA1-202ENST00000348749 SOCS1O15524 211 aa9.08□□□□□ -0.96
CHRNA1-202ENST00000348749 SLC16A7O60669 478 aa9.08□□□□□ -0.96
CHRNA1-202ENST00000348749 NPIPB7O75200 414 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms