RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 SNX29P2Q8IUI4 249 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 LYSMD2Q8IV50 215 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 CENPSQ8N2Z9 138 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 PRSS35Q8N3Z0 413 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 MINDY2Q8NBR6 621 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 DIRAS2Q96HU8 199 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 SDHCQ99643 169 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-201ENST00000346213 TANC2Q9HCD6 1990 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 ANKRD61A6NGH8 418 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 PIN1P1O15428 100 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 TBX1O43435 398 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 TGFAP01135 160 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 MAPK3P27361 379 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-201ENST00000346213 THBS2P35442 1172 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 KIR3DL2P43630 455 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 SELENOVP59797 346 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 GK2Q14410 553 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-201ENST00000346213 PCGF3Q3KNV8 242 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 WDR38Q5JTN6 314 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 FAM209AQ5JX71 171 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 IDNKQ5T6J7 187 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 METAP1DQ6UB28 335 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-201ENST00000346213 BHLHE23Q8NDY6 225 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 OR2AE1Q8NHA4 323 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 ITLN1Q8WWA0 313 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 ITPKCQ96DU7 683 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 DERL3Q96Q80 235 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 NOX4Q9NPH5 578 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 ABCB10Q9NRK6 738 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 ADAM30Q9UKF2 790 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 LRP12Q9Y561 859 aa13.56□□□□□ -0.24
RAB5C-201ENST00000346213 A0A1W2PPK0 400 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 NOTOA8MTQ0 251 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 SRSF10O75494 262 aaKnown RBP13.55□□□□□ -0.24
RAB5C-201ENST00000346213 SRMP19623 302 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 PTBP1P26599 531 aaKnown RBP eCLIP13.55□□□□□ -0.246e-22■■■■■ 138.4
RAB5C-201ENST00000346213 OXA1LQ15070 435 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 CEP78Q5JTW2 689 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 FAM120AOSQ5T036 256 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 ZNF676Q8N7Q3 588 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 OR2Z1Q8NG97 314 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 RNF133Q8WVZ7 376 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 CCL17Q92583 94 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 THRSPQ92748 146 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 ELMOD3Q96FG2 381 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 SOSTQ9BQB4 213 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 PPP1R3EQ9H7J1 279 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 ZNF319Q9P2F9 582 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 DAPK2Q9UIK4 370 aa13.55□□□□□ -0.24
RAB5C-201ENST00000346213 A0A1B0GWJ7 208 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 FABP12A6NFH5 140 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 ACOD1A6NK06 481 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 PDCD5O14737 125 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 HPGDSO60760 199 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 TMEM127O75204 238 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 PNPP00491 289 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 HNRNPCP07910 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
RAB5C-201ENST00000346213 RAC2P15153 192 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 PMELP40967 661 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 TMEM33P57088 247 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 OR10A3P58181 314 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 TNFAIP6P98066 277 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-201ENST00000346213 ZNF92Q03936 586 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 ZNF79Q15937 498 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 CR1LQ2VPA4 569 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 STEAP3Q658P3 488 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 FAM166AQ6J272 317 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 C1orf229Q6ZS94 237 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-201ENST00000346213 CATSPERDQ86XM0 798 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 GPR148Q8TDV2 347 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 DVL3Q92997 716 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-201ENST00000346213 APOBEC3DQ96AK3 386 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-201ENST00000346213 SLAMF6Q96DU3 332 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 SRRQ9GZT4 340 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 DECR2Q9NUI1 292 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 TMEM160Q9NX00 188 aa13.54□□□□□ -0.24
RAB5C-201ENST00000346213 TRBV5-7A0A0A0MS05 114 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 PLSCR5A0PG75 271 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 M0R135 149 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 TPD52L2O43399 206 aaKnown RBP13.53□□□□□ -0.24
RAB5C-201ENST00000346213 AVPP01185 164 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 DCTDP32321 178 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 PRKXP51817 358 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 GLYATL3Q5SZD4 288 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 FAM131AQ6UXB0 335 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 RHOUQ7L0Q8 258 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 PRSS45Q7RTY3 260 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 HPS1Q92902 700 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 ZNF799Q96GE5 643 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 OR2V2Q96R30 315 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 R4GMQ9 66 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 IQCF6A8MYZ5 107 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 F5H5P2 479 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 IGHV2-5P01817 119 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 H2BFMP0C1H6 154 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 OCM2P0CE71 109 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 OCMP0CE72 109 aaPredicted RBP13.53□□□□□ -0.24
RAB5C-201ENST00000346213 SEC61A1P61619 476 aaKnown RBP13.53□□□□□ -0.24
RAB5C-201ENST00000346213 TRIM16LQ309B1 348 aa13.53□□□□□ -0.24
RAB5C-201ENST00000346213 FAM201AQ5SY85 155 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms