RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 IFNA21P01568 189 aa11.68□□□□□ -0.54
CASC4-202ENST00000345795 PRKACAP17612 351 aa11.68□□□□□ -0.54
CASC4-202ENST00000345795 RBP2P50120 134 aa11.68□□□□□ -0.54
CASC4-202ENST00000345795 IAH1Q2TAA2 248 aaPredicted RBP11.68□□□□□ -0.54
CASC4-202ENST00000345795 CCDC28AQ8IWP9 274 aa11.68□□□□□ -0.54
CASC4-202ENST00000345795 OR10AD1Q8NGE0 317 aa11.68□□□□□ -0.54
CASC4-202ENST00000345795 OR6X1Q8NH79 312 aa11.68□□□□□ -0.54
CASC4-202ENST00000345795 EVA1AQ9H8M9 152 aa11.68□□□□□ -0.54
CASC4-202ENST00000345795 C12orf4Q9NQ89 552 aa11.68□□□□□ -0.54
CASC4-202ENST00000345795 EIF3GO75821 320 aaKnown RBP eCLIP11.67□□□□□ -0.54
CASC4-202ENST00000345795 NME2P22392 152 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 MRPS10P82664 201 aaKnown RBP11.67□□□□□ -0.54
CASC4-202ENST00000345795 CLN3Q13286 438 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 ZNF684Q5T5D7 378 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 ATPAF1Q5TC12 328 aaPredicted RBP11.67□□□□□ -0.54
CASC4-202ENST00000345795 C9orf62Q8N4C0 152 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 BMPERQ8N8U9 685 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 HSD17B11Q8NBQ5 300 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 OR1F12Q8NHA8 337 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 THRSPQ92748 146 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 SCMH1Q96GD3 660 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 CDH20Q9HBT6 801 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 PHF1O43189 567 aaPredicted RBP11.67□□□□□ -0.54
CASC4-202ENST00000345795 NPIPB7O75200 414 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 CBX5P45973 191 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 RAP2BP61225 183 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 UBE2V2Q15819 145 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 MRPL14Q6P1L8 145 aaKnown RBP11.67□□□□□ -0.54
CASC4-202ENST00000345795 TMUB2Q71RG4 321 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 SKA3Q8IX90 412 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 GTPBP8Q8N3Z3 284 aaPredicted RBP11.67□□□□□ -0.54
CASC4-202ENST00000345795 NKAIN3Q8N8D7 197 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 FOXRED1Q96CU9 486 aaPredicted RBP11.67□□□□□ -0.54
CASC4-202ENST00000345795 CXorf58Q96LI9 332 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 MS4A7Q9GZW8 240 aaPredicted RBP11.67□□□□□ -0.54
CASC4-202ENST00000345795 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.67□□□□□ -0.54
CASC4-202ENST00000345795 ZNF106Q9H2Y7 1883 aaKnown RBP11.67□□□□□ -0.54
CASC4-202ENST00000345795 C9orf172C9J069 976 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 CDC14BO60729 498 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 S100A11P31949 105 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 ZP1P60852 638 aa11.67□□□□□ -0.54
CASC4-202ENST00000345795 GRB2P62993 217 aaKnown RBP11.67□□□□□ -0.54
CASC4-202ENST00000345795 KLK10O43240 276 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 TXNDC12O95881 172 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 CPT2P23786 658 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 FCGR2CP31995 323 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 MC2RQ01718 297 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 ZNF92Q03936 586 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 Q0VFX4 171 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 UNC119Q13432 240 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 MICBQ29980 383 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 TEX261Q6UWH6 196 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 RFESDQ8TAC1 157 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 U3KQ87 197 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 TRBV5-5A0A0J9YX44 114 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 TOX3O15405 576 aaPredicted RBP11.66□□□□□ -0.54
CASC4-202ENST00000345795 PRAF2O60831 178 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 SERPINA7P05543 415 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 FGF5P12034 268 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 TPRX1Q8N7U7 411 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 FAM206AQ9NX38 181 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 PRSS50Q9UI38 385 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 DMXL1Q9Y485 3027 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 ZNF732B4DXR9 585 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 TFF1P04155 84 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 MMP16P51512 607 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 SUMO3P55854 103 aaPredicted RBP11.66□□□□□ -0.54
CASC4-202ENST00000345795 PSG4Q00888 419 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 HINT2Q9BX68 163 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 TGIF2Q9GZN2 237 aa11.66□□□□□ -0.54
CASC4-202ENST00000345795 OR5H8P0DN80 308 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 ACKR3P25106 362 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 RAC3P60763 192 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 SSPNQ14714 243 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 BIVMQ86UB2 503 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 TCTE3Q8IZS6 198 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 TMEM251Q8N6I4 163 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 ZNF441Q8N8Z8 693 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 C7orf50Q9BRJ6 194 aaKnown RBP11.65□□□□□ -0.54
CASC4-202ENST00000345795 IL36RNQ9UBH0 155 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 VSIG4Q9Y279 399 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 TIMM10BQ9Y5J6 103 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 COL12A1Q99715 3063 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 PTPRQQ9UMZ3 2332 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 MPTX1A8MV57 137 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 TRAPPC2LH3BP13 241 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 LIMK1P53667 647 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 SGPP2Q8IWX5 399 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 EXD3Q8N9H8 876 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 FLVCR1Q9Y5Y0 555 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 DOCK11Q5JSL3 2073 aa11.65□□□□□ -0.54
CASC4-202ENST00000345795 CSPG4Q6UVK1 2322 aa11.65□□□□□ -0.55
CASC4-202ENST00000345795 WDR1O75083 606 aa11.65□□□□□ -0.55
CASC4-202ENST00000345795 VAMP5O95183 116 aa11.65□□□□□ -0.55
CASC4-202ENST00000345795 RBM39Q14498 530 aaKnown RBP11.65□□□□□ -0.55
CASC4-202ENST00000345795 ZNF767PQ75MW2 155 aa11.65□□□□□ -0.55
CASC4-202ENST00000345795 ZNF808Q8N4W9 903 aaPredicted RBP11.65□□□□□ -0.55
CASC4-202ENST00000345795 SLCO5A1Q9H2Y9 848 aa11.65□□□□□ -0.55
CASC4-202ENST00000345795 KCNIP3Q9Y2W7 256 aa11.65□□□□□ -0.55
CASC4-202ENST00000345795 DOPEY2Q9Y3R5 2298 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms