RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 FAM53BQ14153 422 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 FBXL14Q8N1E6 418 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 NOXO1Q8NFA2 376 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 CA5BP1Q8WTZ4 195 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 APH1AQ96BI3 265 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 ADAT1Q9BUB4 502 aaKnown RBP15.62■□□□□ 0.09
SPAST-202ENST00000345662 OBP2AQ9NY56 170 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 BET1LQ9NYM9 111 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 NAT8BQ9UHF3 227 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 DUXBA0A1W2PPF3 345 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 DHHO43323 396 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 CEACAM5P06731 702 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 SURF2Q15527 256 aaPredicted RBP15.62■□□□□ 0.09
SPAST-202ENST00000345662 JMJD6Q6NYC1 403 aaPredicted RBP15.62■□□□□ 0.09
SPAST-202ENST00000345662 AGBL5Q8NDL9 886 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 TSPAN32Q96QS1 320 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 KCNK15Q9H427 330 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 SCN7AQ01118 1682 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.62■□□□□ 0.09
SPAST-202ENST00000345662 FAM74A7A6NL05 159 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 BCAT2O15382 392 aaPredicted RBP15.62■□□□□ 0.09
SPAST-202ENST00000345662 CDC14BO60729 498 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 EPPINO95925 133 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 CT45A10P0DMU9 189 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 TMEM267Q0VDI3 215 aaPredicted RBP15.62■□□□□ 0.09
SPAST-202ENST00000345662 GUCA2BQ16661 112 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 FAM74A3Q4VXF1 159 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 TRAV34A0A0B4J273 112 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 OR5AC1P0C628 307 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 EXTL1Q92935 676 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 ZNF764Q96H86 408 aaPredicted RBP15.62■□□□□ 0.09
SPAST-202ENST00000345662 ALX4Q9H161 411 aaPredicted RBP15.62■□□□□ 0.09
SPAST-202ENST00000345662 PPP1R14DQ9NXH3 145 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 DLK1P80370 383 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 BSXQ3C1V8 233 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 LSRQ86X29 649 aaPredicted RBP15.61■□□□□ 0.09
SPAST-202ENST00000345662 PUSL1Q8N0Z8 303 aaKnown RBP15.61■□□□□ 0.09
SPAST-202ENST00000345662 OR5AS1Q8N127 324 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 CACFD1Q9UGQ2 172 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 P2RY1P47900 373 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 OR10A7Q8NGE5 316 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 OR2T10Q8NGZ9 312 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 OR4C3Q8NH37 302 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 CCL4L1Q8NHW4 92 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 RPS4Y2Q8TD47 263 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 NOL4LQ96MY1 436 aaPredicted RBP15.61■□□□□ 0.09
SPAST-202ENST00000345662 NAT8Q9UHE5 227 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 NRAPQ86VF7 1730 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 C3orf85A0A1B0GTC6 90 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 ERVS71-1P61550 626 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 ZDHHC23Q8IYP9 409 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 CISD2Q8N5K1 135 aaKnown RBP15.61■□□□□ 0.09
SPAST-202ENST00000345662 NRIP2Q9BQI9 281 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 LANCL2Q9NS86 450 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 CD46P15529 392 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 CDAP32320 146 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 CHRNA7P36544 502 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 CLDN15P56746 228 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 NKAIN1Q4KMZ8 207 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 NSUN5P2Q63ZY6 315 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 TAAR6Q96RI8 345 aa15.61■□□□□ 0.09
SPAST-202ENST00000345662 UTP23Q9BRU9 249 aaKnown RBP15.61■□□□□ 0.09
SPAST-202ENST00000345662 ZNF891A8MT65 544 aaPredicted RBP15.6■□□□□ 0.09
SPAST-202ENST00000345662 SLC31A2O15432 143 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 WISP3O95389 354 aaPredicted RBP15.6■□□□□ 0.09
SPAST-202ENST00000345662 F12P00748 615 aaPredicted RBP15.6■□□□□ 0.09
SPAST-202ENST00000345662 SUMO3P55854 103 aaPredicted RBP15.6■□□□□ 0.09
SPAST-202ENST00000345662 EXT1Q16394 746 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 MUCL1Q96DR8 90 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 FRRS1LQ9P0K9 344 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 PITPNC1Q9UKF7 332 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 OR51B4Q9Y5P0 310 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 CFDP00746 253 aaPredicted RBP15.6■□□□□ 0.09
SPAST-202ENST00000345662 CTSDP07339 412 aaPredicted RBP15.6■□□□□ 0.09
SPAST-202ENST00000345662 FFAR4Q5NUL3 377 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 RGS7BPQ6MZT1 257 aaPredicted RBP15.6■□□□□ 0.09
SPAST-202ENST00000345662 KIAA1324LA8MWY0 1029 aaPredicted RBP15.6■□□□□ 0.09
SPAST-202ENST00000345662 FCN1O00602 326 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 LAMTOR5O43504 91 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 C19orf35Q6ZS72 473 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 PHOSPHO2Q8TCD6 241 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 MVB12AQ96EY5 273 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 IL21Q9HBE4 155 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 NEU3Q9UQ49 428 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 TTC3P53804 2025 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 CSNK1EP49674 416 aaKnown RBP15.6■□□□□ 0.09
SPAST-202ENST00000345662 SLC38A11Q08AI6 406 aa15.6■□□□□ 0.09
SPAST-202ENST00000345662 ZNF660Q6AZW8 331 aaPredicted RBP15.6■□□□□ 0.09
SPAST-202ENST00000345662 ECM29Q5VYK3 1845 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 OR5H15A6NDH6 313 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 OR5H1A6NKK0 313 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 NAAAQ02083 359 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 FOXF1Q12946 379 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 FAM78BQ5VT40 261 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 PRR27Q6MZM9 219 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 TERTO14746 1132 aaKnown RBP15.59■□□□□ 0.09
SPAST-202ENST00000345662 RPLP1P05386 114 aaKnown RBP15.59■□□□□ 0.09
SPAST-202ENST00000345662 OR1D5P58170 312 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 FMODQ06828 376 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 OR8G1Q15617 311 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms