RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 DMWDQ09019 674 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 SMAD4Q13485 552 aaKnown RBP7.21□□□□□ -1.26
ATG4A-201ENST00000343524 GPR18Q14330 331 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 TMEM183BQ1AE95 376 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 EXOSC6Q5RKV6 272 aaKnown RBP7.21□□□□□ -1.26
ATG4A-201ENST00000343524 FBXW12Q6X9E4 464 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 LINC00114Q6XXX2 140 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 TMEM182Q6ZP80 229 aaPredicted RBP7.21□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF765Q7L2R6 523 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 PRSS58Q8IYP2 241 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 AGBL5Q8NDL9 886 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 BHLHE23Q8NDY6 225 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 TMEM104Q8NE00 496 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 OR2D3Q8NGH3 330 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 OR4X1Q8NH49 305 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 WFIKKN2Q8TEU8 576 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 TMEM170AQ8WVE7 144 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 RASD2Q96D21 266 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 JSRP1Q96MG2 331 aaPredicted RBP7.21□□□□□ -1.26
ATG4A-201ENST00000343524 MIEN1Q9BRT3 115 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 FAAP24Q9BTP7 215 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 ZMAT3Q9HA38 289 aaKnown RBP7.21□□□□□ -1.26
ATG4A-201ENST00000343524 SEMA5BQ9P283 1151 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 HHLA2Q9UM44 414 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 LSM5Q9Y4Y9 91 aaKnown RBP7.21□□□□□ -1.26
ATG4A-201ENST00000343524 UNC79Q9P2D8 2635 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 A0A0G2JN53 185 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.2□□□□□ -1.26
ATG4A-201ENST00000343524 HCRTR2O43614 444 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 TCF21O43680 179 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 SCGB1D1O95968 90 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 PPBPP02775 128 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 FUT3P21217 361 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 APOBEC1P41238 236 aaKnown RBP7.2□□□□□ -1.26
ATG4A-201ENST00000343524 RND3P61587 244 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 SGCGQ13326 291 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 OR5I1Q13606 314 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 PMS2P11Q13670 270 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 SLC17A1Q14916 467 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 RSPO4Q2I0M5 234 aaPredicted RBP7.2□□□□□ -1.26
ATG4A-201ENST00000343524 C4orf17Q53FE4 359 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 TCEAL5Q5H9L2 206 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 AADACL3Q5VUY0 350 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 TEX38Q6PEX7 206 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 LRRC69Q6ZNQ3 347 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 RTL10Q7L3V2 364 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 LHFPL1Q86WI0 220 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 ARHGEF39Q8N4T4 335 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 CSNK1A1LQ8N752 337 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 OR14L1PQ8NHC6 308 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 OTOSQ8NHW6 89 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 ZNRF4Q8WWF5 429 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 GNPNAT1Q96EK6 184 aaPredicted RBP7.2□□□□□ -1.26
ATG4A-201ENST00000343524 TECTBQ96PL2 329 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 TBL1XR1Q9BZK7 514 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 ULBP3Q9BZM4 244 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 PARP12Q9H0J9 701 aaKnown RBP7.2□□□□□ -1.26
ATG4A-201ENST00000343524 PLK3Q9H4B4 646 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 DNAJC4Q9NNZ3 241 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 NAGKQ9UJ70 344 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF346Q9UL40 294 aaKnown RBP7.2□□□□□ -1.26
ATG4A-201ENST00000343524 MRPS18BQ9Y676 258 aaKnown RBP7.2□□□□□ -1.26
ATG4A-201ENST00000343524 VWA8A3KMH1 1905 aa7.2□□□□□ -1.26
ATG4A-201ENST00000343524 CENPVL1A0A0U1RR11 272 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF860A6NHJ4 632 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 A8MVM7 634 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 MBPP02686 304 aaPredicted RBP7.19□□□□□ -1.26
ATG4A-201ENST00000343524 OPN1LWP04000 364 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 UMODP07911 640 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 OR4A8P0C604 315 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 RAC2P15153 192 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 HMGA1P17096 107 aaKnown RBP7.19□□□□□ -1.26
ATG4A-201ENST00000343524 HSD11B1P28845 292 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 PTGER1P34995 402 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 PPM1AP35813 382 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 OR3A2P47893 321 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 CSNK1A1P48729 337 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 CEBPGP53567 150 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 BTG2P78543 158 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 HSF1Q00613 529 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ENPP2Q13822 863 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 FZD2Q14332 565 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ICAM4Q14773 271 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ARL6IP1Q15041 203 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 KCNMB1Q16558 191 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 LRRC73Q5JTD7 316 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 RTL6Q6ICC9 239 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 SLC18B1Q6NT16 456 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 NUFIP2Q7Z417 695 aaKnown RBP7.19□□□□□ -1.26
ATG4A-201ENST00000343524 DEFB128Q7Z7B8 93 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 SLC22A24Q8N4F4 322 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 TMEM156Q8N614 296 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 GVQW1Q8N7I0 195 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 CYB561D1Q8N8Q1 229 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 TMEM105Q8N8V8 129 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 OR5T1Q8NG75 326 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 OR5AR1Q8NGP9 310 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ZCCHC10Q8TBK6 192 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ZPLD1Q8TCW7 415 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ORAOV1Q8WV07 137 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms