RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ZNF860A6NHJ4 632 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 ZNF141Q15928 474 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 FKBP1CQ5VVH2 108 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 GLIS1Q8NBF1 620 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 R3HDM4Q96D70 268 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 HSPB9Q9BQS6 159 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 CES1P1Q9UKY3 287 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 COL5A2P05997 1499 aaPredicted RBP5.59□□□□□ -1.51
VCAN-203ENST00000343200 CCL16O15467 120 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 HIST1H1TP22492 207 aaPredicted RBP5.59□□□□□ -1.51
VCAN-203ENST00000343200 DCTDP32321 178 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 CCR2P41597 374 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 TEAD2Q15562 447 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 C22orf39Q6P5X5 142 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 LHFPL2Q6ZUX7 228 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 ANKRD37Q7Z713 158 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 PQLC3Q8N755 202 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 OR11L1Q8NGX0 322 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 SCAMP5Q8TAC9 235 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 JAM3Q9BX67 310 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 COMMD5Q9GZQ3 224 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 APOMO95445 188 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 ISL1P61371 349 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 TIAL1Q01085 375 aaKnown RBP eCLIP5.59□□□□□ -1.51
VCAN-203ENST00000343200 LMAN2Q12907 356 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 OR2Y1Q8NGV0 311 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 FBXL18Q96ME1 805 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 SSBP4Q9BWG4 385 aaPredicted RBP5.59□□□□□ -1.51
VCAN-203ENST00000343200 SH2D2AQ9NP31 389 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 CYSLTR2Q9NS75 346 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 PISDQ9UG56 409 aa5.59□□□□□ -1.51
VCAN-203ENST00000343200 P01737 135 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 SOD3P08294 240 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 CDX1P47902 265 aaPredicted RBP5.59□□□□□ -1.52
VCAN-203ENST00000343200 SUOXP51687 545 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 WNT3P56703 355 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 RPS24P62847 133 aaKnown RBP5.59□□□□□ -1.52
VCAN-203ENST00000343200 FAM189BP81408 668 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 OR5M10Q6IEU7 315 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 ABHD15Q6UXT9 468 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 GLCCI1Q86VQ1 547 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 PHOSPHO2Q8TCD6 241 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 SPPL3Q8TCT6 385 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 MARVELD3Q96A59 401 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 CDCP1Q9H5V8 836 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 NKX6-3A6NJ46 265 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 C19orf67A6NJJ6 358 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 CXCL11O14625 94 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 XRCC2O43543 280 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 FCMRO60667 390 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 HLA-GP17693 338 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 SDC1P18827 310 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 RPS4Y1P22090 263 aaKnown RBP5.59□□□□□ -1.52
VCAN-203ENST00000343200 FPR2P25090 351 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 LMO2P25791 158 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 SHC2P98077 582 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 ELAVL3Q14576 367 aaKnown RBP5.59□□□□□ -1.52
VCAN-203ENST00000343200 PDPNQ86YL7 162 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 METTL27Q8N6F8 245 aaPredicted RBP5.59□□□□□ -1.52
VCAN-203ENST00000343200 GJC3Q8NFK1 279 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 OR10AG1Q8NH19 301 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 IGFLR1Q9H665 355 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 TMEM38BQ9NVV0 291 aa5.59□□□□□ -1.52
VCAN-203ENST00000343200 ZNF253O75346 499 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 TPBGQ13641 420 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 IHHQ14623 411 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 LGALSLQ3ZCW2 172 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 PRAMEF5Q5TYX0 476 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 PRAMEF6Q5VXH4 476 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 CST9Q5W186 159 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 TMEM229BQ8NBD8 167 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 OR1L1Q8NH94 360 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 CYB5D2Q8WUJ1 264 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 LRRC29Q8WV35 223 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 GMPPAQ96IJ6 420 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 ASB16Q96NS5 453 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 ALX4Q9H161 411 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 SLC38A8A6NNN8 435 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 DUX1O43812 170 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 INHBBP09529 407 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 KIR2DS2P43631 304 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 MMP16P51512 607 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 FOXK2Q01167 660 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 ST3GAL2Q16842 350 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 ZNF628Q5EBL2 1059 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 YOD1Q5VVQ6 348 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 LAIR1Q6GTX8 287 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 BHLHA15Q7RTS1 189 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 ISG20Q96AZ6 181 aaKnown RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 POM121L2Q96KW2 1035 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 C3orf30Q96M34 536 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 MAGT1Q9H0U3 335 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 OR51B6Q9H340 312 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 SEBOXQ9HB31 216 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 HRASLS2Q9NWW9 162 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 RCL1Q9Y2P8 373 aaKnown RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 A0A1W2PPC4 97 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 CD3DP04234 171 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 ACVR1Q04771 509 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 ZNF77Q15935 545 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms