RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 NHLRC1Q6VVB1 395 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 OR4Q3Q8NH05 313 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 GRAMD2BQ96HH9 432 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 OCEL1Q9H607 264 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 C20orf141Q9NUB4 165 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 GOLT1BQ9Y3E0 138 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 KCNJ3P48549 501 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 SSBP1Q04837 148 aaKnown RBP13.37□□□□□ -0.27
UBE3B-202ENST00000342494 WDR38Q5JTN6 314 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 IL36GQ9NZH8 169 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 BOLA1Q9Y3E2 137 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 KNTC1P50748 2209 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 TRAV38-1A0A0B4J264 116 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 ASCL1P50553 236 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 CNN1P51911 297 aaKnown RBP13.37□□□□□ -0.27
UBE3B-202ENST00000342494 D2HGDHQ8N465 521 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 ST8SIA2Q92186 375 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 TSPAN32Q96QS1 320 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 THYN1Q9P016 225 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 TTC3P53804 2025 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 OR2M5A3KFT3 312 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 GPANK1O95872 356 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 OR4A8P0C604 315 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 ZNF239Q16600 458 aaKnown RBP13.37□□□□□ -0.27
UBE3B-202ENST00000342494 FAM27D1Q5T7N8 215 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 BHLHA9Q7RTU4 235 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 PRSS42Q7Z5A4 293 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 C20orf196Q8IYI0 205 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 OR8B3Q8NGG8 313 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 OR6S1Q8NH40 331 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 OR8B2Q96RD0 313 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 ADGRL4Q9HBW9 690 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 RCL1Q9Y2P8 373 aaKnown RBP13.37□□□□□ -0.27
UBE3B-202ENST00000342494 IGHV5-10-1A0A0J9YXX1 117 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 MDH2P40926 338 aaKnown RBP13.37□□□□□ -0.27
UBE3B-202ENST00000342494 SLC25A35Q3KQZ1 300 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 TMEM147Q9BVK8 224 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 CTDSP1Q9GZU7 261 aa13.37□□□□□ -0.27
UBE3B-202ENST00000342494 ERRFI1Q9UJM3 462 aaPredicted RBP13.37□□□□□ -0.27
UBE3B-202ENST00000342494 PPP1R2P9O14990 202 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 TMEM127O75204 238 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 ZXDAP98168 799 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 WDR34Q96EX3 536 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 ZNF768Q9H5H4 540 aaKnown RBP13.36□□□□□ -0.27
UBE3B-202ENST00000342494 SCN7AQ01118 1682 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 FAM157AC9JC47 383 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 EPHA2P29317 976 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 SKP2Q13309 424 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 Q3ZCU0 254 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 RBPMSQ93062 196 aaKnown RBP13.36□□□□□ -0.27
UBE3B-202ENST00000342494 ZNF416Q9BWM5 594 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 PAPPAQ13219 1627 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 CCL21O00585 134 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 PLPP3O14495 311 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 CT62P0C5K7 136 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 BRS3P32247 399 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 ETFRF1Q6IPR1 90 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 H3F3CQ6NXT2 135 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 CBLN3Q6UW01 205 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 ARRDC1Q8N5I2 433 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 OR4C16Q8NGL9 310 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 CLCF1Q9UBD9 225 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 UBE2L5PA0A1B0GUS4 154 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 OR2W3Q7Z3T1 314 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 GLCCI1Q86VQ1 547 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 NECAP1Q8NC96 275 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 SEBOXQ9HB31 216 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-202ENST00000342494 CYSLTR2Q9NS75 346 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 PDGFAP04085 211 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 GABRB1P18505 474 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 FCER1GP30273 86 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 PTGFRP43088 359 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 ZNF141Q15928 474 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 DEGS2Q6QHC5 323 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 MAMSTRQ6ZN01 415 aa13.36□□□□□ -0.27
UBE3B-202ENST00000342494 UMAD1C9J7I0 102 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 LIMS3P0CW19 117 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 LIMS4P0CW20 117 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 LINC00299Q6ZSB3 139 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 TUSC5Q8IXB3 177 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 TMEM229BQ8NBD8 167 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 OR4F17Q8NGA8 305 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 HMGCLL1Q8TB92 370 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 RYDENQ9NUL5 291 aaKnown RBP13.35□□□□□ -0.27
UBE3B-202ENST00000342494 IGHV3-43A0A0B4J1X8 118 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 F2RL2O00254 374 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 TOX4O94842 621 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 IGHV3-43DP0DP04 118 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 CD80P33681 288 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 GUCA2AQ02747 115 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 STPG1Q5TH74 334 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 RPUSD3Q6P087 351 aaKnown RBP13.35□□□□□ -0.27
UBE3B-202ENST00000342494 ZNF683Q8IZ20 524 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 SLC6A13Q9NSD5 602 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 OR6C3Q9NZP0 311 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 OR5V1Q9UGF6 321 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 OR5B21A6NL26 309 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 CALHM3Q86XJ0 350 aa13.35□□□□□ -0.27
UBE3B-202ENST00000342494 UQCC2Q9BRT2 126 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms