RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 H7C417 338 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 DHHO43323 396 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 HLA-HP01893 362 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 PPP3CBP16298 524 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 NTF4P34130 210 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 MNDAP41218 407 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 RAC3P60763 192 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 FOXO1Q12778 655 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 EIF2S3LQ2VIR3 472 aaKnown RBP11.47□□□□□ -0.57
COL18A1-201ENST00000342220 EXTL1Q92935 676 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 MTFP1Q9UDX5 166 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 GTF3C1Q12789 2109 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 TRAV18A0A075B6X5 111 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 A0A087WZY1 265 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 CTAG2O75638 210 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 CSN2P05814 226 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 PGA4P0DJD7 388 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 PGA3P0DJD8 388 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 CLINT1Q14677 625 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 FAM76BQ5HYJ3 339 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 THEM4Q5T1C6 240 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 SLC16A14Q7RTX9 510 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 SLC36A1Q7Z2H8 476 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 TMEM178AQ8NBL3 297 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 OR8S1Q8NH09 359 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 LIPHQ8WWY8 451 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 DVL3Q92997 716 aaPredicted RBP11.47□□□□□ -0.57
COL18A1-201ENST00000342220 CKLFQ9UBR5 152 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 GGT3PA6NGU5 568 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 TMEM127O75204 238 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 TXNDC12O95881 172 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF35P13682 527 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 SNU13P55769 128 aaKnown RBP11.47□□□□□ -0.57
COL18A1-201ENST00000342220 TSPO2Q5TGU0 170 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF774Q6NX45 483 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 DNM1P46Q6ZS02 220 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 CHST4Q8NCG5 386 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 ADAMTS17Q8TE56 1095 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF703Q9H7S9 590 aaPredicted RBP11.47□□□□□ -0.57
COL18A1-201ENST00000342220 C5orf63A6NC05 138 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 C1orf196B1AJZ1 125 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 K7EM74 188 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 HCKP08631 526 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 ITGA5P08648 1049 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 GTF2F2P13984 249 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF20P17024 532 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 HTR5AP47898 357 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 MECP2P51608 486 aaKnown RBP11.46□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF121P58317 390 aaPredicted RBP11.46□□□□□ -0.57
COL18A1-201ENST00000342220 RNF212Q495C1 297 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF627Q7L945 461 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 OR51S1Q8NGJ8 323 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 C15orf40Q8WUR7 153 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 TMEM41AQ96HV5 264 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 C4orf45Q96LM5 186 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 ZFP57Q9NU63 452 aa11.46□□□□□ -0.57
COL18A1-201ENST00000342220 MEX3AA1L020 520 aaKnown RBP11.46□□□□□ -0.58
COL18A1-201ENST00000342220 UBE2QL1A1L167 161 aa11.46□□□□□ -0.58
COL18A1-201ENST00000342220 TMEM212A6NML5 194 aa11.46□□□□□ -0.58
COL18A1-201ENST00000342220 GOSR2O14653 212 aa11.46□□□□□ -0.58
COL18A1-201ENST00000342220 ADH6P28332 368 aa11.46□□□□□ -0.58
COL18A1-201ENST00000342220 FAUP35544 74 aaKnown RBP11.46□□□□□ -0.58
COL18A1-201ENST00000342220 PPT1P50897 306 aa11.46□□□□□ -0.58
COL18A1-201ENST00000342220 SEC61A1P61619 476 aaKnown RBP11.46□□□□□ -0.58
COL18A1-201ENST00000342220 DCAF12L2Q5VW00 463 aa11.46□□□□□ -0.58
COL18A1-201ENST00000342220 ZNF660Q6AZW8 331 aaPredicted RBP11.46□□□□□ -0.58
COL18A1-201ENST00000342220 ANKRD16Q6P6B7 361 aa11.46□□□□□ -0.58
COL18A1-201ENST00000342220 DTX1Q86Y01 620 aa11.46□□□□□ -0.58
COL18A1-201ENST00000342220 MUC20Q8N307 709 aaPredicted RBP11.46□□□□□ -0.58
COL18A1-201ENST00000342220 ACBD4Q8NC06 268 aa11.46□□□□□ -0.58
COL18A1-201ENST00000342220 CHST6Q9GZX3 395 aa11.46□□□□□ -0.58
COL18A1-201ENST00000342220 OPN4Q9UHM6 478 aa11.46□□□□□ -0.58
COL18A1-201ENST00000342220 COL5A1P20908 1838 aaPredicted RBP11.45□□□□□ -0.58
COL18A1-201ENST00000342220 CX3CR1P49238 355 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 DLX5P56178 289 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 BLOC1S1P78537 153 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 HABP2Q14520 560 aaPredicted RBP11.45□□□□□ -0.58
COL18A1-201ENST00000342220 C2orf76Q3KRA6 126 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 DPPA2Q7Z7J5 298 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 ZNF101Q8IZC7 436 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 LHFPL6Q9Y693 200 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 NBL1P41271 181 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 CLN3Q13286 438 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 PNPLA2Q96AD5 504 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 IP6K3Q96PC2 410 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 TCEAL7Q9BRU2 100 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 TMPRSS13Q9BYE2 586 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 TMEM138Q9NPI0 162 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 GPR84Q9NQS5 396 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 FLVCR1Q9Y5Y0 555 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 NUP210LQ5VU65 1888 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 LOC100509620A0A075B734 347 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 SLC31A2O15432 143 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 ZNF432O94892 652 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 CD3DP04234 171 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 ANOS1P23352 680 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 NFYBP25208 207 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 EGR3Q06889 387 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 JMJD6Q6NYC1 403 aaPredicted RBP11.45□□□□□ -0.58
COL18A1-201ENST00000342220 SLC25A28Q96A46 364 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms