RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 VAMP1P23763 118 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 NTF4P34130 210 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 ALDH3B1P43353 468 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 FAM27BQ5VT28 67 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 SIGIRRQ6IA17 410 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 OR10K1Q8NGX5 313 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 TERB2Q8NHR7 220 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 PP6455Q8WZ26 134 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 SF3B5Q9BWJ5 86 aaKnown RBP13.09□□□□□ -0.31
TPM3-208ENST00000341485 CHST5Q9GZS9 411 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 MED9Q9NWA0 146 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 SDHAF2Q9NX18 166 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 TNFSF18Q9UNG2 199 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 SPDEFO95238 335 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 FCGR2AP12318 317 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 MGMTP16455 207 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 ATP1B3P54709 279 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 FAM189A2Q15884 450 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 SNAI3Q3KNW1 292 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 LRRC37A5PQ49AS3 106 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 ACTBL2Q562R1 376 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 OR10D3Q8NH80 312 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 SUN5Q8TC36 379 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 PPP1R1CQ8WVI7 109 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 SLC6A15Q9H2J7 730 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 COMMD9Q9P000 198 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 GHRLQ9UBU3 117 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 A0A0D9SG52 128 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 FAM25EA8MYX2 175 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 DUS4LO95620 317 aaKnown RBP13.08□□□□□ -0.32
TPM3-208ENST00000341485 RLN2P04090 185 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 CRYGSP22914 178 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 TNFSF10P50591 281 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 KCTD9Q7L273 389 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 KCNRGQ8N5I3 272 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 ZFP62Q8NB50 900 aaPredicted RBP13.08□□□□□ -0.32
TPM3-208ENST00000341485 OR5M9Q8NGP3 310 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 PIGTQ969N2 578 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 SPTSSAQ969W0 71 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 CCDC120Q96HB5 630 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 ADGRG7Q96K78 797 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.08□□□□□ -0.32
TPM3-208ENST00000341485 KCNMB2Q9Y691 235 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 GVINP1Q7Z2Y8 2422 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 ZSCAN5BA6NJL1 495 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 DBX1A6NMT0 343 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 APOC1P02654 83 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 SERPINA2P20848 420 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 CBX5P45973 191 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 NPY4RP50391 375 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 TAS2R31P59538 309 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 SRYQ05066 204 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 ARFRP1Q13795 201 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 ARRDC1Q8N5I2 433 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 C17orf50Q8WW18 174 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 ROBO4Q8WZ75 1007 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 CPNE4Q96A23 557 aaPredicted RBP13.08□□□□□ -0.32
TPM3-208ENST00000341485 TMEM230Q96A57 120 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 SGK3Q96BR1 496 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 SCNM1Q9BWG6 230 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 PECRQ9BY49 303 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 WDR13Q9H1Z4 485 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 NUP50Q9UKX7 468 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 GPR132Q9UNW8 380 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 CSAG2Q9Y5P2 127 aa13.08□□□□□ -0.32
TPM3-208ENST00000341485 DMXL1Q9Y485 3027 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 RNF222A6NCQ9 220 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 ZNF716A6NP11 495 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 CEACAM18A8MTB9 384 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 SYNGR3O43761 229 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 AMY2BP19961 511 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 BLVRBP30043 206 aaPredicted RBP13.07□□□□□ -0.32
TPM3-208ENST00000341485 CLDN15P56746 228 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 UBA52P62987 128 aaKnown RBP13.07□□□□□ -0.32
TPM3-208ENST00000341485 HGFACQ04756 655 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 ZNF345Q14585 488 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 SLC10A1Q14973 349 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 RAB35Q15286 201 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 SLC16A14Q7RTX9 510 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 OR5H2Q8NGV7 314 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 ST8SIA2Q92186 375 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 C10orf35Q96D05 121 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 DHRS9Q9BPW9 319 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 TM2D1Q9BX74 207 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 C5orf66Q9H5L9 145 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 LDAHQ9H6V9 325 aa13.07□□□□□ -0.32
TPM3-208ENST00000341485 CNTRLQ7Z7A1 2325 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 SGCEO43556 437 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 MTRF1O75570 445 aaKnown RBP13.06□□□□□ -0.32
TPM3-208ENST00000341485 OR2F2O95006 317 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 ACKR3P25106 362 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 OR2F1Q13607 317 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 ATXN7L3Q14CW9 347 aaPredicted RBP13.06□□□□□ -0.32
TPM3-208ENST00000341485 ZNF774Q6NX45 483 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 IGFL2Q6UWQ7 119 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 GPR137CQ8N3F9 429 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 CCDC54Q8NEL0 328 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 OR13G1Q8NGZ3 307 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 OR1S1Q8NH92 325 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 SNIP1Q8TAD8 396 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms