RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 RGS19P49795 217 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 CLDN6P56747 220 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 RPS4XP62701 263 aaKnown RBP13.56□□□□□ -0.24
LIMK2-203ENST00000340552 C17orf82Q86X59 251 aaPredicted RBP13.56□□□□□ -0.24
LIMK2-203ENST00000340552 RNASEH2CQ8TDP1 164 aaKnown RBP13.56□□□□□ -0.24
LIMK2-203ENST00000340552 FAM46BQ96A09 425 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 RTBDNQ9BSG5 229 aaPredicted RBP13.56□□□□□ -0.24
LIMK2-203ENST00000340552 COL6A3P12111 3177 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 PCK2Q16822 640 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 ULK3Q6PHR2 472 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 SLC35D2Q76EJ3 337 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 THNSL2Q86YJ6 484 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 TMEM156Q8N614 296 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 WFDC1Q9HC57 220 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 CBLN4Q9NTU7 201 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 IL17BQ9UHF5 180 aa13.56□□□□□ -0.24
LIMK2-203ENST00000340552 TLCD2A6NGC4 264 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 A6NNC1 897 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 M0R143 59 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 GPR75O95800 540 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 GFERP55789 205 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 MFGE8Q08431 387 aaPredicted RBP13.55□□□□□ -0.24
LIMK2-203ENST00000340552 HNF4GQ14541 408 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 MEP1BQ16820 701 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 FHL5Q5TD97 284 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 ARHGEF39Q8N4T4 335 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 HSD17B11Q8NBQ5 300 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 APCDD1LQ8NCL9 501 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 DNASE2BQ8WZ79 361 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 ANKRD9Q96BM1 317 aaPredicted RBP13.55□□□□□ -0.24
LIMK2-203ENST00000340552 C19orf53Q9UNZ5 99 aaPredicted RBP13.55□□□□□ -0.24
LIMK2-203ENST00000340552 A0A1B0GW64 132 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 PIAS2O75928 621 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 GABRA3P34903 492 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 APOBEC1P41238 236 aaKnown RBP13.55□□□□□ -0.24
LIMK2-203ENST00000340552 RAB38P57729 211 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 CCL20P78556 96 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 MRPS11P82912 194 aaKnown RBP13.55□□□□□ -0.24
LIMK2-203ENST00000340552 UNC119Q13432 240 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 PRTGQ2VWP7 1150 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 FDX2Q6P4F2 183 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 OGFOD3Q6PK18 319 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 DEFB123Q8N688 67 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 CYYR1Q96J86 154 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 FAM210BQ96KR6 192 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 GPX7Q96SL4 187 aaPredicted RBP13.55□□□□□ -0.24
LIMK2-203ENST00000340552 PRRX2Q99811 253 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 FOXD3Q9UJU5 478 aaPredicted RBP13.55□□□□□ -0.24
LIMK2-203ENST00000340552 MRPS18CQ9Y3D5 142 aaKnown RBP13.55□□□□□ -0.24
LIMK2-203ENST00000340552 RHBDD3Q9Y3P4 386 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 VCANP13611 3396 aa13.55□□□□□ -0.24
LIMK2-203ENST00000340552 ATXN7O15265 892 aaPredicted RBP13.54□□□□□ -0.24
LIMK2-203ENST00000340552 DEDDO75618 318 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 TBPP20226 339 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 CXCR1P25024 350 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 GLIPR1P48060 266 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 AFF3P51826 1226 aaKnown RBP13.54□□□□□ -0.24
LIMK2-203ENST00000340552 FAM53BQ14153 422 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 EXOSC7Q15024 291 aaKnown RBP13.54□□□□□ -0.24
LIMK2-203ENST00000340552 IAH1Q2TAA2 248 aaPredicted RBP13.54□□□□□ -0.24
LIMK2-203ENST00000340552 UBALD2Q8IYN6 164 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 PTX4Q96A99 478 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 GPR87Q9BY21 358 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 PITPNC1Q9UKF7 332 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 MEMO1Q9Y316 297 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 ASXL3Q9C0F0 2248 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 RPS2P15880 293 aaKnown RBP13.54□□□□□ -0.24
LIMK2-203ENST00000340552 RPP30P78346 268 aaKnown RBP13.54□□□□□ -0.24
LIMK2-203ENST00000340552 SQSTM1Q13501 440 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 SLC17A1Q14916 467 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 DCAF10Q5QP82 559 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 TMEM183AQ8IXX5 376 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 FAM213BQ8TBF2 198 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 RCC1LQ96I51 464 aaKnown RBP13.54□□□□□ -0.24
LIMK2-203ENST00000340552 ADGRG7Q96K78 797 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 FOXN4Q96NZ1 517 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 GINS3Q9BRX5 216 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 RCL1Q9Y2P8 373 aaKnown RBP13.54□□□□□ -0.24
LIMK2-203ENST00000340552 LSM5Q9Y4Y9 91 aaKnown RBP13.54□□□□□ -0.24
LIMK2-203ENST00000340552 CEACAM18A8MTB9 384 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 LMX1BO60663 402 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 GIMD1P0DJR0 217 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 FSTP19883 344 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 SUCLG1P53597 346 aaKnown RBP13.54□□□□□ -0.24
LIMK2-203ENST00000340552 CTXN1P60606 82 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 PRPS1P60891 318 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 C1orf100Q5SVJ3 147 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 LCN10Q6JVE6 187 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 DCXRQ7Z4W1 244 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 DTWD2Q8NBA8 298 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 NPRL2Q8WTW4 380 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 DNAJA3Q96EY1 480 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 OR8B4Q96RC9 309 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 SOHLH2Q9NX45 425 aa13.54□□□□□ -0.24
LIMK2-203ENST00000340552 UNC13CQ8NB66 2214 aa13.53□□□□□ -0.24
LIMK2-203ENST00000340552 IGHV5-51A0A0C4DH38 117 aa13.53□□□□□ -0.24
LIMK2-203ENST00000340552 CRYABP02511 175 aaKnown RBP13.53□□□□□ -0.24
LIMK2-203ENST00000340552 PNLIPP16233 465 aa13.53□□□□□ -0.24
LIMK2-203ENST00000340552 MDKP21741 143 aaPredicted RBP13.53□□□□□ -0.24
LIMK2-203ENST00000340552 GAGE1Q13065 139 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms