RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 LHFPL3Q86UP9 236 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 RDH10Q8IZV5 341 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 CNIH3Q8TBE1 160 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 C4orf36Q96KX1 117 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 ALG8Q9BVK2 526 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 ISG20L2Q9H9L3 353 aaKnown RBP12.79□□□□□ -0.36
VAPA-201ENST00000340541 GPR173Q9NS66 373 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 ERVK13-1Q9NX77 482 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 KAAG1Q9UBP8 84 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 CLN8Q9UBY8 286 aa12.79□□□□□ -0.36
VAPA-201ENST00000340541 RPL36Q9Y3U8 105 aaKnown RBP12.79□□□□□ -0.36
VAPA-201ENST00000340541 A0A1B0GVI7 797 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 A0A1B0GW55 424 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 LOC107986453A0A1B0GWG9 222 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 PQLC2LA1A4F0 135 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 TMEM89A2RUT3 159 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 C22orf46C9J442 243 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 AKR7A2O43488 359 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 SYT7O43581 403 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 FADS2O95864 444 aaKnown RBP12.78□□□□□ -0.36
VAPA-201ENST00000340541 DUX4L2P0CJ85 424 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 DUX4L3P0CJ86 424 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 DUX4L4P0CJ87 422 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 DUX4L5P0CJ88 424 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 DUX4L6P0CJ89 424 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 DUX4L7P0CJ90 424 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 LIMS3P0CW19 117 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 LIMS4P0CW20 117 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 EPHA1P21709 976 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 ACTA2P62736 377 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 ACTG2P63267 376 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 TTC23Q5W5X9 447 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 STUMQ69YW2 141 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 DUX4L9Q6RFH8 374 aaPredicted RBP12.78□□□□□ -0.36
VAPA-201ENST00000340541 SYS1Q8N2H4 156 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 DHRSXQ8N5I4 330 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 CYGBQ8WWM9 190 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 RAB40AQ8WXH6 277 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 AQP3Q92482 292 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 C12orf43Q96C57 262 aaKnown RBP12.78□□□□□ -0.36
VAPA-201ENST00000340541 JAM3Q9BX67 310 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 DCLRE1BQ9H816 532 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 FGF20Q9NP95 211 aaPredicted RBP12.78□□□□□ -0.36
VAPA-201ENST00000340541 INPP5EQ9NRR6 644 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 DUX4Q9UBX2 424 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 TENM1Q9UKZ4 2725 aa12.78□□□□□ -0.36
VAPA-201ENST00000340541 KIR2DS1A0A191URI9 304 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 ANKRD61A6NGH8 418 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 OR4C45A6NMZ5 311 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 J3QLW9 94 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 ISG15P05161 165 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 GNAO1P09471 354 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 UBCP0CG48 685 aaKnown RBP12.77□□□□□ -0.37
VAPA-201ENST00000340541 ZNF19P17023 458 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 NPY4RP50391 375 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 CCR9P51686 369 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 MICBQ29980 383 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 KLHL22Q53GT1 634 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 HAGHLQ6PII5 290 aaPredicted RBP12.77□□□□□ -0.37
VAPA-201ENST00000340541 EGFL6Q8IUX8 553 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 FGFRL1Q8N441 504 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 CCDC54Q8NEL0 328 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 SGMS2Q8NHU3 365 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 NANPQ8TBE9 248 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 CCL13Q99616 98 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 ADI1Q9BV57 179 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 SUCNR1Q9BXA5 334 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 RASSF4Q9H2L5 321 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 ERVK-18Q9QC07 812 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 AUP1Q9Y679 476 aa12.77□□□□□ -0.37
VAPA-201ENST00000340541 ERICH4A6NGS2 130 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 E9PI62 339 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 DVL1O14640 695 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 TMPRSS2O15393 492 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 HTR1AP08908 422 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 CAPGP40121 348 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 TGM4P49221 684 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 GMFBP60983 142 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 ACTG1P63261 375 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 IL18R1Q13478 541 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 UBE2V2Q15819 145 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 KLF17Q5JT82 389 aaPredicted RBP12.76□□□□□ -0.37
VAPA-201ENST00000340541 ATPAF1Q5TC12 328 aaPredicted RBP12.76□□□□□ -0.37
VAPA-201ENST00000340541 LAIR2Q6ISS4 152 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 FAM216BQ8N7L0 139 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 OR5T2Q8NGG2 359 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 OR10AC1Q8NH08 325 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 ANGPTL6Q8NI99 470 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 NRG4Q8WWG1 115 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 GCDHQ92947 438 aaPredicted RBP12.76□□□□□ -0.37
VAPA-201ENST00000340541 TECTBQ96PL2 329 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 NUDT16L1Q9BRJ7 211 aaKnown RBP12.76□□□□□ -0.37
VAPA-201ENST00000340541 CHST5Q9GZS9 411 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 SNTG1Q9NSN8 517 aa12.76□□□□□ -0.37
VAPA-201ENST00000340541 IGKV1-27A0A075B6S5 117 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 H0YAE9 185 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 J3QT63 122 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 SYNGR1O43759 233 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 TFF1P04155 84 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 PPIAL4GP0DN37 164 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms