RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 DTX1Q86Y01 620 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 SGPP2Q8IWX5 399 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 SLC25A45Q8N413 288 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 D2HGDHQ8N465 521 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 SUMF1Q8NBK3 374 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 OR5L1Q8NGL2 311 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 BSCL2Q96G97 398 aaPredicted RBP12.65□□□□□ -0.38
CPSF7-201ENST00000340437 CLCC1Q96S66 551 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 PECRQ9BY49 303 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 PCDHGA1Q9Y5H4 931 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 SHANK1Q9Y566 2161 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 TSPAN15O95858 294 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 IFNA2P01563 188 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 CD79AP11912 226 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 HLA-GP17693 338 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 TMEM33P57088 247 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 MST1LQ2TV78 715 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 C5orf46Q6UWT4 87 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 NANPQ8TBE9 248 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 MCTS1Q9ULC4 181 aaKnown RBP12.65□□□□□ -0.38
CPSF7-201ENST00000340437 APC2O95996 2303 aa12.65□□□□□ -0.38
CPSF7-201ENST00000340437 DBX1A6NMT0 343 aa12.65□□□□□ -0.39
CPSF7-201ENST00000340437 H3BMH7 237 aa12.65□□□□□ -0.39
CPSF7-201ENST00000340437 TLX3O43711 291 aaPredicted RBP12.65□□□□□ -0.39
CPSF7-201ENST00000340437 OMGP23515 440 aa12.65□□□□□ -0.39
CPSF7-201ENST00000340437 CSNK1A1P48729 337 aa12.65□□□□□ -0.39
CPSF7-201ENST00000340437 SRSF4Q08170 494 aaKnown RBP12.65□□□□□ -0.39
CPSF7-201ENST00000340437 ZP4Q12836 540 aa12.65□□□□□ -0.39
CPSF7-201ENST00000340437 DOK3Q7L591 496 aa12.65□□□□□ -0.39
CPSF7-201ENST00000340437 CPEB2Q7Z5Q1 589 aaKnown RBP12.65□□□□□ -0.39
CPSF7-201ENST00000340437 PLPPR5Q32ZL2 321 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 FAM180AQ6UWF9 173 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 SYT13Q7L8C5 426 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 MISPQ8IVT2 679 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 C1orf147Q96MC9 270 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-201ENST00000340437 ZNF385AQ96PM9 386 aaKnown RBP12.64□□□□□ -0.39
CPSF7-201ENST00000340437 RSRP1Q9BUV0 290 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 TRAF3IP2O43734 574 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-201ENST00000340437 PET100P0DJ07 73 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 RSU1Q15404 277 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 ZNF837Q96EG3 531 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-201ENST00000340437 GPHA2Q96T91 129 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 MRPL13Q9BYD1 178 aaKnown RBP12.64□□□□□ -0.39
CPSF7-201ENST00000340437 FBXO7Q9Y3I1 522 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 LRP4O75096 1905 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 NPIPA2E9PIF3 369 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 F8VVB4 439 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 F8VWA3 439 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 NPIPA3F8WFD2 350 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 MFNGO00587 321 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 NDUFA2O43678 99 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 FOSL2P15408 326 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 RFC3P40938 356 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 GGNBP1Q5YKI7 109 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 Q7L0L9 218 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 ERGIC1Q969X5 290 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 USB1Q9BQ65 265 aaKnown RBP12.64□□□□□ -0.39
CPSF7-201ENST00000340437 SLC5A7Q9GZV3 580 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 SMOC1Q9H4F8 434 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 GPR27Q9NS67 375 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 WIF1Q9Y5W5 379 aa12.64□□□□□ -0.39
CPSF7-201ENST00000340437 OR13C7P0DN81 318 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 HKR1P10072 659 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 TBPP20226 339 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 PIGPP57054 158 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 GPR85P60893 370 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 PHYHD1Q5SRE7 291 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 EIF5AL1Q6IS14 154 aaKnown RBP12.63□□□□□ -0.39
CPSF7-201ENST00000340437 SMRP1Q8NCR6 262 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 LYZL4Q96KX0 146 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 RGCCQ9H4X1 137 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 RCC2Q9P258 522 aaKnown RBP12.63□□□□□ -0.39
CPSF7-201ENST00000340437 MYOTQ9UBF9 498 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 TMEM131Q92545 1883 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 ARG1P05089 322 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 CAMLGP49069 296 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 TAS2R46P59540 309 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 OR2B8PP59922 312 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 DHRS11Q6UWP2 260 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 C5orf24Q7Z6I8 188 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 KIRREL1Q96J84 757 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 C1orf123Q9NWV4 160 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 RCL1Q9Y2P8 373 aaKnown RBP12.63□□□□□ -0.39
CPSF7-201ENST00000340437 RFNGQ9Y644 331 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 TNFSF12O43508 249 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 ZFAND5O76080 213 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 LCATP04180 440 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 OR5H8P0DN80 308 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 ZNF708P17019 499 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 CAV2P51636 162 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 NXPH1P58417 271 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 OR14K1Q8NGZ2 314 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 PADI1Q9ULC6 663 aa12.63□□□□□ -0.39
CPSF7-201ENST00000340437 CACNA1DQ01668 2161 aa12.62□□□□□ -0.39
CPSF7-201ENST00000340437 CBX5P45973 191 aa12.62□□□□□ -0.39
CPSF7-201ENST00000340437 CLINT1Q14677 625 aa12.62□□□□□ -0.39
CPSF7-201ENST00000340437 MIDNQ504T8 468 aa12.62□□□□□ -0.39
CPSF7-201ENST00000340437 VAX1Q5SQQ9 334 aa12.62□□□□□ -0.39
CPSF7-201ENST00000340437 ADAM5Q6NVV9 412 aa12.62□□□□□ -0.39
CPSF7-201ENST00000340437 RBMS3Q6XE24 437 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms