RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ACTA1P68133 377 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 MFGE8Q08431 387 aaPredicted RBP11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 LRRC36Q1X8D7 754 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 ATPAF1Q5TC12 328 aaPredicted RBP11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 Q6ZSR3 168 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 SCCPDHQ8NBX0 429 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 FAM71F1Q96KD3 344 aaPredicted RBP11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 APOL4Q9BPW4 351 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 DNAJB11Q9UBS4 358 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 ZNF69Q9UC07 566 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 MRM2Q9UI43 246 aaKnown RBP11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 GTF2A1LQ9UNN4 478 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 PIGLQ9Y2B2 252 aa11.07□□□□□ -0.64
SIRPB3P-201ENST00000340424 A0A1W2PQL4 384 aaPredicted RBP11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 METTL15A6NJ78 407 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 P2RY10O00398 339 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 DLGAP1O14490 977 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 NRASP01111 189 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 COMPP49747 757 aaPredicted RBP11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 GPM6AP51674 278 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 SNRPGP62308 76 aaKnown RBP11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 ACTG1P63261 375 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 HOXA4Q00056 320 aaPredicted RBP11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 WDR38Q5JTN6 314 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 CLVS2Q5SYC1 327 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 ZNF684Q5T5D7 378 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 GPR157Q5UAW9 335 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 METTL11BQ5VVY1 283 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 PLCXD3Q63HM9 321 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 STUMQ69YW2 141 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 PLEKHG7Q6ZR37 379 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 BTN2A1Q7KYR7 527 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 YIPF7Q8N8F6 280 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 OR10H4Q8NGA5 316 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 ZNF671Q8TAW3 534 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 RPL3LQ92901 407 aaKnown RBP11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 EME1Q96AY2 570 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 MED30Q96HR3 178 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 C9orf16Q9BUW7 83 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 TTTY10Q9BZA0 68 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 OR51I2Q9H344 312 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 PPP1R3EQ9H7J1 279 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 SMURF1Q9HCE7 757 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 V9GYS6 101 aa11.06□□□□□ -0.64
SIRPB3P-201ENST00000340424 IGHV3OR15-7A0A075B7D8 119 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 TRAV40A0A0B4J280 105 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 ZNF732B4DXR9 585 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 CLDN34H7C241 214 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 NDUFB3O43676 98 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 MPZL2O60487 215 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 RGS9O75916 674 aaPredicted RBP11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 FAHP16930 419 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 CCL1P22362 96 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 ALDH3B2P48448 385 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 FGF12P61328 243 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 UBA52P62987 128 aaKnown RBP11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 PDCD1Q15116 288 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 OCLNQ16625 522 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 LRRC10Q5BKY1 277 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 CEP78Q5JTW2 689 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 TMEM42Q69YG0 159 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 FAM220AQ7Z4H9 259 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 KCTD20Q7Z5Y7 419 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 ZNF573Q86YE8 665 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 CBR4Q8N4T8 237 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 SIGLECL1Q8N7X8 197 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 ZDHHC22Q8N966 263 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 C22orf15Q8WYQ4 148 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 ST8SIA4Q92187 359 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 ANKRD60Q9BZ19 345 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 RASL12Q9NYN1 266 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 RPUSD1Q9UJJ7 312 aaKnown RBP11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 POLDIP2Q9Y2S7 368 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 PCDHGB1Q9Y5G3 927 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 KPTNQ9Y664 436 aa11.05□□□□□ -0.64
SIRPB3P-201ENST00000340424 FBN3Q75N90 2809 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 A0A1B0GVI7 797 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 TMEM89A2RUT3 159 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 E9PQ18 207 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 TOX4O94842 621 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 IGHV4-38-2P0DP08 117 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 MMP9P14780 707 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 GLRA1P23415 457 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 PRTN3P24158 256 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 TGM4P49221 684 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 IL13RA1P78552 427 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 KCTD21Q4G0X4 260 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 C12orf54Q6X4T0 127 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 MOB3CQ70IA8 216 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 SSX6Q7RTT6 188 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 CATSPERDQ86XM0 798 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 EGFL6Q8IUX8 553 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 CMTM4Q8IZR5 234 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 KIR3DL3Q8N743 410 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 ANGPTL6Q8NI99 470 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 AQP3Q92482 292 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 GCDHQ92947 438 aaPredicted RBP11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 SLC25A28Q96A46 364 aa11.04□□□□□ -0.64
SIRPB3P-201ENST00000340424 TMIGD2Q96BF3 282 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms