RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ARRDC1-AS1Q9H2J1 176 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 PRKRAO75569 313 aaKnown RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 PRDX1Q06830 199 aaKnown RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 FBXL6Q8N531 539 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 SLAMF6Q96DU3 332 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 SGK494Q96LW2 274 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 NPAS1Q99742 590 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 PAAF1Q9BRP4 392 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 SEBOXQ9HB31 216 aaPredicted RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 IL23AQ9NPF7 189 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 HSF4Q9ULV5 492 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 PHF3Q92576 2039 aaKnown RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 SMAD7O15105 426 aaKnown RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 SLC2A10O95528 541 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 AOAHP28039 575 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 AVPR2P30518 371 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 FAM71E1Q6IPT2 247 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 OR2W3Q7Z3T1 314 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 YRDCQ86U90 279 aaKnown RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 UQCC1Q9NVA1 299 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 PLEKHB1Q9UF11 243 aaPredicted RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 PPT2Q9UMR5 302 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 A0A1B0GTW7 788 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 RNFT1Q5M7Z0 435 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 CCDC190Q86UF4 302 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 ARFGAP1Q8N6T3 406 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 A4GALTQ9NPC4 353 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 ZNF815PA8K554 130 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 PPIHO43447 177 aaKnown RBP11.6□□□□□ -0.55
USP47-202ENST00000339865 STAG3L3P0CL85 134 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 GNG10P50151 68 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 RPL27P61353 136 aaKnown RBP11.6□□□□□ -0.55
USP47-202ENST00000339865 FABP5Q01469 135 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 OR10A7Q8NGE5 316 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 OR1L1Q8NH94 360 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 SMIM6P0DI80 62 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 SDHBP21912 280 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 C1orf140Q5VVS0 124 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 CSF3RQ99062 836 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 ABHD14AQ9BUJ0 271 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 CXorf36Q9H7Y0 433 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 SLC45A2Q9UMX9 530 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 CACNA1EQ15878 2313 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 HCRTR1O43613 425 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 ACP1P24666 158 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 DLK2Q6UY11 383 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 OR13G1Q8NGZ3 307 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 OR4C45A6NMZ5 311 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 IFITM5A6NNB3 132 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 B4DEV8 164 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 TMEM179BQ7Z7N9 219 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 ZDHHC23Q8IYP9 409 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 PLCE1Q9P212 2302 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 ZNF750Q32MQ0 723 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 EID2BQ96D98 161 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 USP3Q9Y6I4 520 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 PRSS21Q9Y6M0 314 aa11.6□□□□□ -0.55
USP47-202ENST00000339865 DIRC3C9JPN6 131 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 MT-ATP6P00846 226 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 ARSAP15289 507 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 DRD1P21728 446 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 RELBQ01201 579 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 OR2I1PQ8NGU4 316 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 TMEM56Q96MV1 263 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 PCYT2Q99447 389 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 GJB3O75712 270 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 PDPNQ86YL7 162 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 FLYWCH2Q96CP2 140 aaKnown RBP11.59□□□□□ -0.55
USP47-202ENST00000339865 SMIM19Q96E16 107 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 SFRP2Q96HF1 295 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 MKRN2OSH3BPM6 223 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 ADAM20O43506 726 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 SLC6A1P30531 599 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 CYB561P49447 251 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 CTBSQ01459 385 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 GAB4Q2WGN9 574 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 FBXL14Q8N1E6 418 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 C11orf68Q9H3H3 251 aaKnown RBP11.59□□□□□ -0.55
USP47-202ENST00000339865 GZMKP49863 264 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 TAS1R1Q7RTX1 841 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 CALHM1Q8IU99 346 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 TMEM178AQ8NBL3 297 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 HIST1H4GQ99525 98 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 TIMP4Q99727 224 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 ISG20L2Q9H9L3 353 aaKnown RBP11.59□□□□□ -0.55
USP47-202ENST00000339865 CHODLQ9H9P2 273 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 PIPOXQ9P0Z9 390 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 EMCNQ9ULC0 261 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 SPNP16150 400 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 ZNF26P17031 533 aaPredicted RBP11.59□□□□□ -0.55
USP47-202ENST00000339865 ID4P47928 161 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 ARF6P62330 175 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 NKAIN1Q4KMZ8 207 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 SLC25A26Q70HW3 274 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 LSMEM1Q8N8F7 131 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 EDAQ92838 391 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 DHCR7Q9UBM7 475 aaKnown RBP11.59□□□□□ -0.55
USP47-202ENST00000339865 ELOA3CA0A087WX78 387 aaPredicted RBP11.59□□□□□ -0.55
USP47-202ENST00000339865 TRGV10A0A0A0MS01 117 aa11.59□□□□□ -0.55
USP47-202ENST00000339865 FAM181BA6NEQ2 426 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms