RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 DCAF7P61962 342 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 CYCSP99999 105 aaKnown RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 OR1Q1Q15612 314 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 AKR1C8PQ5T2L2 129 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 SFTPA2Q8IWL1 248 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 OR52E2Q8NGJ4 325 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 OR5L2Q8NGL0 311 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 CDS1Q92903 461 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 RELTQ969Z4 430 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 ZNF681Q96N22 645 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 PRRT1Q99946 306 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 PYGO2Q9BRQ0 406 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 HIPK2Q9H2X6 1198 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 MSL2Q9HCI7 577 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 LANCL2Q9NS86 450 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 SUSD2Q9UGT4 822 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 PUS1Q9Y606 427 aaKnown RBP eCLIP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 URGCP-MRPS24S4R325 110 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 ASXL3Q9C0F0 2248 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 SEC16AO15027 2179 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 FIGNL2A6NMB9 653 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 M0QZK8 103 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 GGCTO75223 188 aaKnown RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 DIRAS3O95661 229 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 TLX1P31314 330 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 SLC35A1P78382 337 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 QRFPP83859 136 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 GXYLT1Q4G148 440 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 RPUSD3Q6P087 351 aaKnown RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 SLC22A25Q6T423 547 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 ZNF765Q7L2R6 523 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 C17orf64Q86WR6 236 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 OR1P1Q8NH06 330 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 OR51A7Q8NH64 312 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 TERB2Q8NHR7 220 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 CCL4L1Q8NHW4 92 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 CASTOR1Q8WTX7 329 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 C5orf34Q96MH7 638 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 PRAP1Q96NZ9 151 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 URM1Q9BTM9 101 aaKnown RBP4.92□□□□□ -1.62
CSDE1-202ENST00000339438 OR8D2Q9GZM6 311 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 RAB22AQ9UL26 194 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 ZFP30Q9Y2G7 519 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 ARHGAP21Q5T5U3 1957 aa4.92□□□□□ -1.62
CSDE1-202ENST00000339438 COL12A1Q99715 3063 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 A0A0U1RQV5 110 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 C5orf51A6NDU8 294 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 DEDDO75618 318 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 JTBO76095 146 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 SFT2D2O95562 160 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 PPBPP02775 128 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 PRLHRP49683 370 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 ELLP55199 621 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-202ENST00000339438 SELENOTP62341 195 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 COL10A1Q03692 680 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 TGM3Q08188 693 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 DUSP8Q13202 625 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 PRSS8Q16651 343 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 TDRG1Q3Y452 100 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 TMEM128Q5BJH2 165 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 CDC20BQ86Y33 519 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 SLC35G3Q8N808 338 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 AGBL5Q8NDL9 886 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 OR4K13Q8NH42 304 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 OR4C6Q8NH72 309 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 CD300LFQ8TDQ1 290 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 DCBLD2Q96PD2 775 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 ULBP3Q9BZM4 244 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 EIF5A2Q9GZV4 153 aaKnown RBP4.91□□□□□ -1.62
CSDE1-202ENST00000339438 NELFAQ9H3P2 528 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 KCNJ16Q9NPI9 418 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 TUBD1Q9UJT1 453 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 RFNGQ9Y644 331 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 HCFC1P51610 2035 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 A0A0G2JN53 185 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 A0A1W2PN81 502 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 NKX6-3A6NJ46 265 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 CDC40O60508 579 aaKnown RBP eCLIP4.91□□□□□ -1.62
CSDE1-202ENST00000339438 CYB5AP00167 134 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 AKR1C4P17516 323 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 HRH1P35367 487 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 CHRNA7P36544 502 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 NCBP2P52298 156 aaKnown RBP eCLIP4.91□□□□□ -1.62
CSDE1-202ENST00000339438 PRPS1P60891 318 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 ICAM4Q14773 271 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 P2RY6Q15077 328 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 LPAL2Q16609 132 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 CHRFAM7AQ494W8 412 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 C4orf17Q53FE4 359 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 EIF5AL1Q6IS14 154 aaKnown RBP4.91□□□□□ -1.62
CSDE1-202ENST00000339438 CATSPERDQ86XM0 798 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 KMT5CQ86Y97 462 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 TSTD1Q8NFU3 115 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 OR5AR1Q8NGP9 310 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 ZNF417Q8TAU3 575 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 MARCH1Q8TCQ1 289 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 FAM122AQ96E09 287 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 CNTNAP3Q9BZ76 1288 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 VAX2Q9UIW0 290 aa4.91□□□□□ -1.62
CSDE1-202ENST00000339438 CNOT1A5YKK6 2376 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms