RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SCN1BQ07699 218 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 TMEM255AQ5JRV8 349 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 SSX8Q7RTT4 187 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 OR2W3Q7Z3T1 314 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 CALHM1Q8IU99 346 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 POC5Q8NA72 575 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 GALNT11Q8NCW6 608 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 OR8S1Q8NH09 359 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 OR5P3Q8WZ94 311 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 GCDHQ92947 438 aaPredicted RBP12.58□□□□□ -0.4
CBX3-201ENST00000337620 RNASE6Q93091 150 aaKnown RBP12.58□□□□□ -0.4
CBX3-201ENST00000337620 THAP7Q9BT49 309 aaPredicted RBP12.58□□□□□ -0.4
CBX3-201ENST00000337620 CST11Q9H112 138 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 KCNJ16Q9NPI9 418 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 RABL2AQ9UBK7 228 aaPredicted RBP12.58□□□□□ -0.4
CBX3-201ENST00000337620 PURGQ9UJV8 347 aaKnown RBP12.58□□□□□ -0.4
CBX3-201ENST00000337620 RABL2BQ9UNT1 228 aa12.58□□□□□ -0.4
CBX3-201ENST00000337620 DIDO1Q9BTC0 2240 aaKnown RBP12.57□□□□□ -0.4
CBX3-201ENST00000337620 CADP27708 2225 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 ISPDA4D126 451 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 PTAFRP25105 342 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 INPP1P49441 399 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 PDZK1IP1Q13113 114 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 RSU1Q15404 277 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 FBXL19-AS1Q494R0 122 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 C19orf18Q8NEA5 215 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 TMEM59Q9BXS4 323 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 METTL9Q9H1A3 318 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 FBLN5Q9UBX5 448 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 DUSP13Q9UII6 198 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 CFAP46Q8IYW2 2715 aa12.57□□□□□ -0.4
CBX3-201ENST00000337620 DPRXA6NFQ7 191 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 GRNP28799 593 aaKnown RBP12.56□□□□□ -0.4
CBX3-201ENST00000337620 HAAOP46952 286 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 VEGFCP49767 419 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 DGCR2P98153 550 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 MOGAT2Q3SYC2 334 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 MBNL2Q5VZF2 373 aaKnown RBP12.56□□□□□ -0.4
CBX3-201ENST00000337620 OR51F2Q8NH61 342 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 LRRC46Q96FV0 321 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 TMEM100Q9NV29 134 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 ABCD4O14678 606 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 LANCL1O43813 399 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 HTR3BO95264 441 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 CSTBP04080 98 aaKnown RBP12.56□□□□□ -0.4
CBX3-201ENST00000337620 CD3GP09693 182 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 MGMTP16455 207 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 GLRXP35754 106 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 DEFA1P59665 94 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 DEFA3P59666 94 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 NKX6-1P78426 367 aaPredicted RBP12.56□□□□□ -0.4
CBX3-201ENST00000337620 BSPH1Q075Z2 132 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 C4orf17Q53FE4 359 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 SLC25A26Q70HW3 274 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 ZNF611Q8N823 705 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 CHST4Q8NCG5 386 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 OR8G5Q8NG78 346 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 LINC01560Q8TB33 94 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 NICN1Q9BSH3 213 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 ADAT1Q9BUB4 502 aaKnown RBP12.56□□□□□ -0.4
CBX3-201ENST00000337620 LPAR5Q9H1C0 372 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 NGBQ9NPG2 151 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 NDRG3Q9UGV2 375 aa12.56□□□□□ -0.4
CBX3-201ENST00000337620 CTDSPLO15194 276 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 KITLGP21583 273 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 GNG3P63215 75 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 OR8G1Q15617 311 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 MSMPQ1L6U9 139 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 ZNF57Q68EA5 555 aaPredicted RBP12.55□□□□□ -0.4
CBX3-201ENST00000337620 SLC22A25Q6T423 547 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 LRP11Q86VZ4 500 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 OR51T1Q8NGJ9 327 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 C15orf40Q8WUR7 153 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 MICU1Q9BPX6 476 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 URM1Q9BTM9 101 aaKnown RBP12.55□□□□□ -0.4
CBX3-201ENST00000337620 SELENOIQ9C0D9 397 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 AUNIPQ9H7T9 357 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 ZMAT3Q9HA38 289 aaKnown RBP12.55□□□□□ -0.4
CBX3-201ENST00000337620 IGKV1-12A0A0C4DH73 117 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 OR5B21A6NL26 309 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 H0YL77 283 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 IGKV1D-12P01611 117 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 MNDAP41218 407 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 RAB12Q6IQ22 244 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 BATF2Q8N1L9 274 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 OR52I2Q8NH67 350 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 SMIM4Q8WVI0 70 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 FCAMRQ8WWV6 532 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 YIPF5Q969M3 257 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 BBC3Q96PG8 261 aaPredicted RBP12.55□□□□□ -0.4
CBX3-201ENST00000337620 RTL8AQ9BWD3 113 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 TBC1D24Q9ULP9 559 aa12.55□□□□□ -0.4
CBX3-201ENST00000337620 A0A0A6YYH2 397 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 A6NJ64 397 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 RAB27BO00194 218 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 PRB1P04280 392 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 ZNF250P15622 560 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 RPS23P62266 143 aaKnown RBP12.54□□□□□ -0.4
CBX3-201ENST00000337620 RPS27AP62979 156 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms