RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 TMEM104Q8NE00 496 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 NTNG2Q96CW9 530 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 SLC17A2O00624 439 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 AQP7O14520 342 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 TMEM11P17152 192 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 PCSK6P29122 969 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 MAGEB1P43366 347 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 LILRA3Q8N6C8 439 aaPredicted RBP11.01□□□□□ -0.65
FN1-202ENST00000336916 C17orf47Q8NEP4 570 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 OR2A1Q8NGT9 310 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 ST8SIA2Q92186 375 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 PPP1CBP62140 327 aa11□□□□□ -0.65
FN1-202ENST00000336916 TNFAIP6P98066 277 aaPredicted RBP11□□□□□ -0.65
FN1-202ENST00000336916 DEFA6Q01524 100 aa11□□□□□ -0.65
FN1-202ENST00000336916 LYG2Q86SG7 212 aa11□□□□□ -0.65
FN1-202ENST00000336916 OR8B3Q8NGG8 313 aa11□□□□□ -0.65
FN1-202ENST00000336916 PATE1Q8WXA2 126 aa11□□□□□ -0.65
FN1-202ENST00000336916 C2orf50Q96LR7 162 aa11□□□□□ -0.65
FN1-202ENST00000336916 OR8B2Q96RD0 313 aa11□□□□□ -0.65
FN1-202ENST00000336916 ZMAT3Q9HA38 289 aaKnown RBP11□□□□□ -0.65
FN1-202ENST00000336916 HINT3Q9NQE9 182 aaKnown RBP11□□□□□ -0.65
FN1-202ENST00000336916 RPA2P15927 270 aa11□□□□□ -0.65
FN1-202ENST00000336916 TMPRSS3P57727 454 aa11□□□□□ -0.65
FN1-202ENST00000336916 LYRM7Q5U5X0 104 aa11□□□□□ -0.65
FN1-202ENST00000336916 SLC25A42Q86VD7 318 aa11□□□□□ -0.65
FN1-202ENST00000336916 SLC22A13Q9Y226 551 aa11□□□□□ -0.65
FN1-202ENST00000336916 KIAA1671Q9BY89 1806 aa11□□□□□ -0.65
FN1-202ENST00000336916 LANCL1O43813 399 aa11□□□□□ -0.65
FN1-202ENST00000336916 FGF7P21781 194 aa11□□□□□ -0.65
FN1-202ENST00000336916 CORO6Q6QEF8 472 aa11□□□□□ -0.65
FN1-202ENST00000336916 GALNT16Q8N428 558 aa11□□□□□ -0.65
FN1-202ENST00000336916 OR52L2PQ8NGH6 319 aa11□□□□□ -0.65
FN1-202ENST00000336916 NRG4Q8WWG1 115 aa11□□□□□ -0.65
FN1-202ENST00000336916 SEC22AQ96IW7 307 aa11□□□□□ -0.65
FN1-202ENST00000336916 IGHV1OR15-9A0A0B4J2B8 117 aa11□□□□□ -0.65
FN1-202ENST00000336916 M0QYG6 137 aa11□□□□□ -0.65
FN1-202ENST00000336916 TSPAN7P41732 249 aa11□□□□□ -0.65
FN1-202ENST00000336916 TM4SF19Q96DZ7 209 aa11□□□□□ -0.65
FN1-202ENST00000336916 WDR34Q96EX3 536 aa11□□□□□ -0.65
FN1-202ENST00000336916 DBX1A6NMT0 343 aa11□□□□□ -0.65
FN1-202ENST00000336916 ATP6V1FQ16864 119 aa11□□□□□ -0.65
FN1-202ENST00000336916 STAC2Q6ZMT1 411 aa11□□□□□ -0.65
FN1-202ENST00000336916 TMUB2Q71RG4 321 aa11□□□□□ -0.65
FN1-202ENST00000336916 IGHV1OR21-1A0A087WYE8 117 aa11□□□□□ -0.65
FN1-202ENST00000336916 SIAH2O43255 324 aa11□□□□□ -0.65
FN1-202ENST00000336916 KRTCAP3Q53RY4 240 aa11□□□□□ -0.65
FN1-202ENST00000336916 ZNF385BQ569K4 471 aa11□□□□□ -0.65
FN1-202ENST00000336916 HES3Q5TGS1 186 aa11□□□□□ -0.65
FN1-202ENST00000336916 UQCC3Q6UW78 93 aa11□□□□□ -0.65
FN1-202ENST00000336916 FBXL6Q8N531 539 aa11□□□□□ -0.65
FN1-202ENST00000336916 KLHDC1Q8N7A1 406 aa11□□□□□ -0.65
FN1-202ENST00000336916 TEX37Q96LM6 180 aa11□□□□□ -0.65
FN1-202ENST00000336916 CFHR5Q9BXR6 569 aa11□□□□□ -0.65
FN1-202ENST00000336916 ZNF707Q96C28 371 aaPredicted RBP10.99□□□□□ -0.65
FN1-202ENST00000336916 IL36GQ9NZH8 169 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 NPTNQ9Y639 398 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 RLFQ13129 1914 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 NME2P22392 152 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 GUSBP11Q6P575 273 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 ANKRD37Q7Z713 158 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 OR51I2Q9H344 312 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 A6NIN4 97 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 C1QBP02746 253 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 SPRED3Q2MJR0 410 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 FAHD1Q6P587 224 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
FN1-202ENST00000336916 OR5H8P0DN80 308 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 RPL12P30050 165 aaKnown RBP10.99□□□□□ -0.65
FN1-202ENST00000336916 ZNF425Q6IV72 752 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 VASH2Q86V25 355 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 TMEM130Q8N3G9 435 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 OR4S2Q8NH73 311 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 ACSM4P0C7M7 580 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 SLC25A6P12236 298 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 TMEM268Q5VZI3 342 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 HSD17B11Q8NBQ5 300 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 RDH5Q92781 318 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 ALKBH3Q96Q83 286 aaPredicted RBP10.99□□□□□ -0.65
FN1-202ENST00000336916 ELLP55199 621 aaPredicted RBP10.99□□□□□ -0.65
FN1-202ENST00000336916 SMRP1Q8NCR6 262 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 SLC25A40Q8TBP6 338 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 MZB1Q8WU39 189 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 LHX4Q969G2 390 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 RAB18Q9NP72 206 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 SLC31A2O15432 143 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 IL5P05113 134 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 ISL1P61371 349 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 BATFQ16520 125 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 LILRA6Q6PI73 481 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 BHLHA15Q7RTS1 189 aaPredicted RBP10.99□□□□□ -0.65
FN1-202ENST00000336916 ROBO4Q8WZ75 1007 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 COX14Q96I36 57 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 LHX9Q9NQ69 397 aa10.99□□□□□ -0.65
FN1-202ENST00000336916 A0A0B4J2E0 115 aa10.98□□□□□ -0.65
FN1-202ENST00000336916 A0A1B0GX12 115 aa10.98□□□□□ -0.65
FN1-202ENST00000336916 OR6C68A6NDL8 312 aa10.98□□□□□ -0.65
FN1-202ENST00000336916 EPXP11678 715 aa10.98□□□□□ -0.65
FN1-202ENST00000336916 ACP1P24666 158 aa10.98□□□□□ -0.65
FN1-202ENST00000336916 EVX1P49640 407 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms