RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PPP1R1AQ13522 171 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 WDSUB1Q8N9V3 476 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 OR10V1Q8NGI7 309 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 TRAV17A0A0B4J275 112 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 AQP7O14520 342 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 ICMTO60725 284 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 P2RX3P56373 397 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 RBMXL3Q8N7X1 1067 aaKnown RBP11.53□□□□□ -0.56
VSTM4-202ENST00000332853 ST7LQ8TDW4 575 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 HPSE2Q8WWQ2 592 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 SPSB1Q96BD6 273 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 LRP5LA4QPB2 252 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 SCO1O75880 301 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 NGFRP08138 427 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 NANOS3P60323 173 aaKnown RBP11.53□□□□□ -0.56
VSTM4-202ENST00000332853 RAC3P60763 192 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 GNB1P62873 340 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 TMEM128Q5BJH2 165 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 RCL1Q9Y2P8 373 aaKnown RBP11.53□□□□□ -0.56
VSTM4-202ENST00000332853 MRPS18BQ9Y676 258 aaKnown RBP11.53□□□□□ -0.56
VSTM4-202ENST00000332853 SPAARA0A1B0GVQ0 90 aa11.52□□□□□ -0.56
VSTM4-202ENST00000332853 LANCL1O43813 399 aa11.52□□□□□ -0.56
VSTM4-202ENST00000332853 LIMS1P48059 325 aa11.52□□□□□ -0.56
VSTM4-202ENST00000332853 RIMS4Q9H426 269 aaPredicted RBP11.52□□□□□ -0.56
VSTM4-202ENST00000332853 H3BP45 60 aa11.52□□□□□ -0.56
VSTM4-202ENST00000332853 FUT3P21217 361 aa11.52□□□□□ -0.56
VSTM4-202ENST00000332853 SOHLH1Q5JUK2 328 aa11.52□□□□□ -0.56
VSTM4-202ENST00000332853 HIST2H3PS2Q5TEC6 136 aa11.52□□□□□ -0.56
VSTM4-202ENST00000332853 SLC17A5Q9NRA2 495 aa11.52□□□□□ -0.56
VSTM4-202ENST00000332853 AK3Q9UIJ7 227 aa11.52□□□□□ -0.56
VSTM4-202ENST00000332853 C17orf51A8MQB3 221 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 ZNF79Q15937 498 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 HAGHQ16775 308 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 OPA3Q9H6K4 179 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 ST6GALNAC2Q9UJ37 374 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 CEP290O15078 2479 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 ANKRD20A5PA0PJZ0 165 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 TGM6O95932 706 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 HBE1P02100 147 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 ARL3P36405 182 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 OR2W3Q7Z3T1 314 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 AQP7P3A6NL99 342 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 ADRA2CP18825 462 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 ZXDAP98168 799 aa11.52□□□□□ -0.57
VSTM4-202ENST00000332853 TMEM127O75204 238 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 DHRS2Q13268 280 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 TEX261Q6UWH6 196 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 ZNF71Q9NQZ8 489 aaPredicted RBP11.51□□□□□ -0.57
VSTM4-202ENST00000332853 U3KQ87 197 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 OR4C45A6NMZ5 311 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 SOCS1O15524 211 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 IL5P05113 134 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 RPS16P62249 146 aaKnown RBP11.51□□□□□ -0.57
VSTM4-202ENST00000332853 OR10X1Q8NGY0 326 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 GDF15Q99988 308 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 LSM2Q9Y333 95 aaKnown RBP11.51□□□□□ -0.57
VSTM4-202ENST00000332853 DEFB108AA8MXU0 73 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 SLC38A6Q8IZM9 456 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 ASB5Q8WWX0 329 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 TXNL1O43396 289 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 SMIM10L1P0DMW3 83 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 BMP5P22003 454 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 ZNF626Q68DY1 528 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 RBMS3Q6XE24 437 aaKnown RBP11.51□□□□□ -0.57
VSTM4-202ENST00000332853 Q6ZRG5 221 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 VWCEQ96DN2 955 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 SMIM10Q96HG1 83 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 ZNF385AQ96PM9 386 aaKnown RBP11.51□□□□□ -0.57
VSTM4-202ENST00000332853 DLL4Q9NR61 685 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 URGCP-MRPS24S4R325 110 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 MTCL1Q9Y4B5 1905 aaKnown RBP11.51□□□□□ -0.57
VSTM4-202ENST00000332853 DFFBO76075 338 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 ZIC2O95409 532 aaPredicted RBP11.51□□□□□ -0.57
VSTM4-202ENST00000332853 ONECUT2O95948 504 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 LIFP15018 202 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 GNG3P63215 75 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 IFITM3Q01628 133 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 COL13A1Q5TAT6 717 aaPredicted RBP11.51□□□□□ -0.57
VSTM4-202ENST00000332853 C11orf87Q6NUJ2 197 aa11.51□□□□□ -0.57
VSTM4-202ENST00000332853 E5RGE8 158 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 EFNB2P52799 333 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 H3F3CQ6NXT2 135 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 OIT3Q8WWZ8 545 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 ST8SIA2Q92186 375 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 MARVELD1Q9BSK0 173 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 NSG2Q9Y328 171 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 ZNF646O15015 1829 aaPredicted RBP11.5□□□□□ -0.57
VSTM4-202ENST00000332853 DCTN6O00399 190 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 JTBO76095 146 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 ZNF205O95201 554 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 ASAH2BP0C7U1 165 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 CD80P33681 288 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 LCN15Q6UWW0 184 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 LIN7CQ9NUP9 197 aaKnown RBP11.5□□□□□ -0.57
VSTM4-202ENST00000332853 H2AFB1P0C5Y9 115 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 FPR2P25090 351 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 TAGLN2P37802 199 aaKnown RBP11.5□□□□□ -0.57
VSTM4-202ENST00000332853 CLDN23Q96B33 292 aa11.5□□□□□ -0.57
VSTM4-202ENST00000332853 USB1Q9BQ65 265 aaKnown RBP11.5□□□□□ -0.57
VSTM4-202ENST00000332853 CHST6Q9GZX3 395 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms