RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 HOXD9P28356 352 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-201ENST00000331920 SLC37A1P57057 533 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 TWIST1Q15672 202 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 C20orf196Q8IYI0 205 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 OR1L6Q8NGR2 347 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 ADAT3Q96EY9 351 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-201ENST00000331920 RSG1Q9BU20 258 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 HSPB8Q9UJY1 196 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 VSIG4Q9Y279 399 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 TMEM30CPA0ZSE6 113 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 AANATQ16613 207 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 TMEM251Q8N6I4 163 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 PSG11Q9UQ72 335 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 TOMM34Q15785 309 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-201ENST00000331920 TNXAQ16473 311 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 ZNF343Q6P1L6 599 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 OR52N1Q8NH53 320 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 DMRTA2Q96SC8 542 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 UBTD1Q9HAC8 227 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 PPP1CCP36873 323 aaKnown RBP14.78□□□□□ -0.04
PTCH1-201ENST00000331920 GUCA2AQ02747 115 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 SLC48A1Q6P1K1 146 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 SCD5Q86SK9 330 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 FAM24BQ8N5W8 94 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 PPIL1Q9Y3C6 166 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 WNT3P56703 355 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 HIST3H3Q16695 136 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 SLC25A43Q8WUT9 341 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-201ENST00000331920 PAM16Q9Y3D7 125 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 SLX4Q8IY92 1834 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 CICQ96RK0 1608 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-201ENST00000331920 DNAJC25-GNG10A0A024R161 153 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 PTGESO14684 152 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 FGF2P09038 288 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 KCNJ3P48549 501 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 DUSP18Q8NEJ0 188 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 ISG20L2Q9H9L3 353 aaKnown RBP14.78□□□□□ -0.04
PTCH1-201ENST00000331920 ZMIZ1Q9ULJ6 1067 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 MS4A8Q9BY19 250 aa14.77□□□□□ -0.04
PTCH1-201ENST00000331920 DRGXA6NNA5 263 aa14.77□□□□□ -0.04
PTCH1-201ENST00000331920 HRASP01112 189 aa14.77□□□□□ -0.04
PTCH1-201ENST00000331920 SNRPEP62304 92 aaKnown RBP14.77□□□□□ -0.04
PTCH1-201ENST00000331920 BTG1P62324 171 aa14.77□□□□□ -0.04
PTCH1-201ENST00000331920 CLRN3Q8NCR9 226 aa14.77□□□□□ -0.04
PTCH1-201ENST00000331920 KCNK15Q9H427 330 aa14.77□□□□□ -0.04
PTCH1-201ENST00000331920 MT-CO3P00414 261 aa14.77□□□□□ -0.04
PTCH1-201ENST00000331920 DCTDP32321 178 aa14.77□□□□□ -0.04
PTCH1-201ENST00000331920 NANOGP1Q8N7R0 232 aa14.77□□□□□ -0.04
PTCH1-201ENST00000331920 ALKBH3Q96Q83 286 aaPredicted RBP14.77□□□□□ -0.04
PTCH1-201ENST00000331920 UQCC1Q9NVA1 299 aa14.77□□□□□ -0.04
PTCH1-201ENST00000331920 FAM208AQ9UK61 1670 aaKnown RBP14.77□□□□□ -0.05
PTCH1-201ENST00000331920 TMSB15BA0A087X1C1 80 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 H3BMH7 237 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 MKRN2OSH3BPM6 223 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 CXCL13O43927 109 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 LIMS3P0CW19 117 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 LIMS4P0CW20 117 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 SARAFQ96BY9 339 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 ZNF426Q9BUY5 554 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 LHX3Q9UBR4 397 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 KIF13AQ9H1H9 1805 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 A0A1W2PN81 502 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 BPIFA4PQ86YQ2 179 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 RFESDQ8TAC1 157 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 ORAI1Q96D31 301 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 TCF21O43680 179 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 SYT14P1Q58G82 188 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 OR4A47Q6IF82 309 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 BAP18Q8IXM2 172 aa14.77□□□□□ -0.05
PTCH1-201ENST00000331920 CMPK2Q5EBM0 449 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 LKAAEAR1Q8TD35 194 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 MYOZ1Q9NP98 299 aaPredicted RBP14.76□□□□□ -0.05
PTCH1-201ENST00000331920 A0A087X0M5 115 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 A0A1B0GX30 115 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 RPL18Q07020 188 aaKnown RBP14.76□□□□□ -0.05
PTCH1-201ENST00000331920 R4GMQ9 66 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 EGR3Q06889 387 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 BCL7CQ8WUZ0 217 aaPredicted RBP14.76□□□□□ -0.05
PTCH1-201ENST00000331920 TMEM9BQ9NQ34 198 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 PRRX1P54821 245 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 SLC38A11Q08AI6 406 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 PAQR6Q6TCH4 344 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 MRPL43Q8N983 215 aaKnown RBP14.76□□□□□ -0.05
PTCH1-201ENST00000331920 OR2A25A4D2G3 310 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 ZNF25P17030 456 aaPredicted RBP14.76□□□□□ -0.05
PTCH1-201ENST00000331920 ZNF137PP52743 207 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 SHBQ15464 509 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 TREX1Q9NSU2 369 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 FKBP11Q9NYL4 201 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 THYN1Q9P016 225 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 LIPGQ9Y5X9 500 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 MBLAC1A4D2B0 266 aaPredicted RBP14.76□□□□□ -0.05
PTCH1-201ENST00000331920 LMX1BO60663 402 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 CLDN18P56856 261 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 SSX8Q7RTT4 187 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 SLC37A2Q8TED4 501 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 PGPEP1Q9NXJ5 209 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 FMN2Q9NZ56 1722 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 GPNMBQ14956 572 aa14.76□□□□□ -0.05
PTCH1-201ENST00000331920 ELAVL1Q15717 326 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms