RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 OR14J1Q9UGF5 321 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 MTCH2Q9Y6C9 303 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 EREGO14944 169 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 TNFSF14O43557 240 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 CT45A8P0DMV1 189 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 CT45A9P0DMV2 189 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 RAB38P57729 211 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 ACKR1Q16570 336 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 CT45A2Q5DJT8 189 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 PLXDC2Q6UX71 529 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 C5orf24Q7Z6I8 188 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 KCNG3Q8TAE7 436 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 TSACCQ96A04 125 aaPredicted RBP21.48■■□□□ 1.03
SOX1-201ENST00000330949 PLA2G2FQ9BZM2 168 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 KIAA1456Q9P272 454 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 THAP10Q9P2Z0 257 aaPredicted RBP21.48■■□□□ 1.03
SOX1-201ENST00000330949 ARHGEF17Q96PE2 2063 aaPredicted RBP21.48■■□□□ 1.03
SOX1-201ENST00000330949 RND3P61587 244 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 ST6GALNAC5Q9BVH7 336 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 PIAS3Q9Y6X2 628 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 B4DEV8 164 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 NSA2O95478 260 aaKnown RBP21.47■■□□□ 1.03
SOX1-201ENST00000330949 APBB3O95704 486 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 ECI1P42126 302 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 KIR2DS3Q14952 304 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 FIGLAQ6QHK4 219 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 TMEM183AQ8IXX5 376 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 ZNF519Q8TB69 540 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 MRPL24Q96A35 216 aaKnown RBP21.47■■□□□ 1.03
SOX1-201ENST00000330949 ZFYVE21Q9BQ24 234 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 FOXD3Q9UJU5 478 aaPredicted RBP21.47■■□□□ 1.03
SOX1-201ENST00000330949 H0YGG7 62 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 HRKO00198 91 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 RAD51DO75771 328 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 MBPP02686 304 aaPredicted RBP21.47■■□□□ 1.03
SOX1-201ENST00000330949 SNU13P55769 128 aaKnown RBP21.47■■□□□ 1.03
SOX1-201ENST00000330949 ARF3P61204 181 aaPredicted RBP21.47■■□□□ 1.03
SOX1-201ENST00000330949 HAGHQ16775 308 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 C21orf62-AS1Q17RA5 79 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.47■■□□□ 1.03
SOX1-201ENST00000330949 ADAT3Q96EY9 351 aaPredicted RBP21.47■■□□□ 1.03
SOX1-201ENST00000330949 SNX22Q96L94 193 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 ATG101Q9BSB4 218 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 STARD5Q9NSY2 213 aa21.47■■□□□ 1.03
SOX1-201ENST00000330949 CDRT15L2A8MXV6 281 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 NR2C1P13056 603 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 PVRP15151 417 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 RUNX3Q13761 415 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 CD226Q15762 336 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 CBLN3Q6UW01 205 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 GLIPR1L1Q6UWM5 242 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 TMEM59Q9BXS4 323 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 MARCH11A6NNE9 402 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 TMEM50BP56557 158 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.46■■□□□ 1.03
SOX1-201ENST00000330949 SULF2Q8IWU5 870 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 R3HDM4Q96D70 268 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 GPR87Q9BY21 358 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.46■■□□□ 1.03
SOX1-201ENST00000330949 SLC17A4Q9Y2C5 497 aa21.46■■□□□ 1.03
SOX1-201ENST00000330949 FAM221BA6H8Z2 402 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 CDC14BO60729 498 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 HSPB1P04792 205 aaKnown RBP21.45■■□□□ 1.02
SOX1-201ENST00000330949 GIMD1P0DJR0 217 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 H3F3AP84243 136 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 C4orf17Q53FE4 359 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 DEGS2Q6QHC5 323 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 SFTPA2Q8IWL1 248 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 FLVCR1-AS1Q8TAF5 88 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 RPP25Q9BUL9 199 aaKnown RBP21.45■■□□□ 1.02
SOX1-201ENST00000330949 CYP8B1Q9UNU6 501 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 MRPS28Q9Y2Q9 187 aaKnown RBP21.45■■□□□ 1.02
SOX1-201ENST00000330949 LOC101059948A0A1B0GTJ6 334 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 ZNF823P16415 610 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 CCL20P78556 96 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 LANCL3Q6ZV70 420 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 ARHGAP5-AS1Q96IT6 56 aa21.45■■□□□ 1.02
SOX1-201ENST00000330949 BGLAPP02818 100 aa21.44■■□□□ 1.02
SOX1-201ENST00000330949 MMP16P51512 607 aa21.44■■□□□ 1.02
SOX1-201ENST00000330949 PATE1Q8WXA2 126 aa21.44■■□□□ 1.02
SOX1-201ENST00000330949 SLC25A36Q96CQ1 311 aa21.44■■□□□ 1.02
SOX1-201ENST00000330949 DKKL1Q9UK85 242 aa21.44■■□□□ 1.02
SOX1-201ENST00000330949 WSB1Q9Y6I7 421 aa21.44■■□□□ 1.02
SOX1-201ENST00000330949 DFFBO76075 338 aa21.44■■□□□ 1.02
SOX1-201ENST00000330949 AKT2P31751 481 aa21.44■■□□□ 1.02
SOX1-201ENST00000330949 FNDC7Q5VTL7 733 aa21.44■■□□□ 1.02
SOX1-201ENST00000330949 CYB561D1Q8N8Q1 229 aa21.44■■□□□ 1.02
SOX1-201ENST00000330949 TXNIPQ9H3M7 391 aa21.44■■□□□ 1.02
SOX1-201ENST00000330949 PGA4P0DJD7 388 aa21.43■■□□□ 1.02
SOX1-201ENST00000330949 PGA5P0DJD9 388 aa21.43■■□□□ 1.02
SOX1-201ENST00000330949 CHRFAM7AQ494W8 412 aa21.43■■□□□ 1.02
SOX1-201ENST00000330949 TMEM240Q5SV17 173 aa21.43■■□□□ 1.02
SOX1-201ENST00000330949 NAXEQ8NCW5 288 aa21.43■■□□□ 1.02
SOX1-201ENST00000330949 SHDQ96IW2 340 aa21.43■■□□□ 1.02
SOX1-201ENST00000330949 COA3Q9Y2R0 106 aaPredicted RBP21.43■■□□□ 1.02
SOX1-201ENST00000330949 MPZL1O95297 269 aa21.43■■□□□ 1.02
SOX1-201ENST00000330949 GCGP01275 180 aa21.43■■□□□ 1.02
SOX1-201ENST00000330949 CD200P41217 278 aa21.43■■□□□ 1.02
SOX1-201ENST00000330949 URM1Q9BTM9 101 aaKnown RBP21.43■■□□□ 1.02
SOX1-201ENST00000330949 APOOQ9BUR5 198 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms